PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014548.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

SRS

Protein Properties

Length: 370aa MW: 40516.6 Da PI: 7.5839

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014548.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	209	1.2e-64	128	291	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....aeaaskrkrel..............kskk 82 g asCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstWvpa+krrerqqq +a+++++ +++ + +++++ ++ PCP014548.1 128 GVASCQDCGNQAKKDCIHMRCRTCCKSRGFDCTTHVKSTWVPASKRRERQQQVTALQQQHHHQHqdhmqH-----HHHHQqqqlqvirgenskrLREN 220 5689***********************************************99998887777444331.....22222234556666666554445 PP DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 s+ s ++ ++++++el++ ++P+evss+avfrcv+vs++d+ ++++aYqtav+i+Gh+f GiL+dqG+e+ PCP014548.1 221 PSTKPSRRILTNTNTSELDVVNFPPEVSSPAVFRCVKVSAIDE-KDQYAYQTAVNIAGHLFTGILFDQGPES 291 5555566666666677888888***************87.679********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MAGFFSLGRG GSDDQHNSNN PPPPDHHHHH HQIAPETLFW YKNEDVANQP YKSFELWQQQ 60 EQLLHLQTQP SQRLYQPHPH HHQDLYASAA ALGVGPSSRG SDDTSSSRSA AAAFTTMRSS 120 SGGGGSGGVA SCQDCGNQAK KDCIHMRCRT CCKSRGFDCT THVKSTWVPA SKRRERQQQV 180 TALQQQHHHQ HQDHMQHHHH HQQQQLQVIR GENSKRLREN PSTKPSRRIL TNTNTSELDV 240 VNFPPEVSSP AVFRCVKVSA IDEKDQYAYQ TAVNIAGHLF TGILFDQGPE SPNYNMNMAA 300 ETSSAGGVNS QPLNLVAGAT TAVNTASIDG GGGHEGVAVA GSTTVIDPSS LYPAPINTYM 360 GTQFFLPPRS

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MAGFFSLGRG GSDDQHNSNN PPPPDHHHHH HQIAPETLFW YKNEDVANQP YKSFELWQQQ  60
EQLLHLQTQP SQRLYQPHPH HHQDLYASAA ALGVGPSSRG SDDTSSSRSA AAAFTTMRSS  120
SGGGGSGGVA SCQDCGNQAK KDCIHMRCRT CCKSRGFDCT THVKSTWVPA SKRRERQQQV  180
TALQQQHHHQ HQDHMQHHHH HQQQQLQVIR GENSKRLREN PSTKPSRRIL TNTNTSELDV  240
VNFPPEVSSP AVFRCVKVSA IDEKDQYAYQ TAVNIAGHLF TGILFDQGPE SPNYNMNMAA  300
ETSSAGGVNS QPLNLVAGAT TAVNTASIDG GGGHEGVAVA GSTTVIDPSS LYPAPINTYM  360
GTQFFLPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	2e-63	SRS family protein