PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014115.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 266aa    MW: 28783.2 Da    PI: 8.698
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014115.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.000141471851255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++  L++l+ +      +K + a++L +A+ YI+ Lq
  PCP014115.1 147 RKEKLGERITALQQLVSPY-----GKTDTASVLHEAMGYIRFLQ 185
                  67788899999*****999.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAESGGFEGD HLAVTEGTSF SQLLFAADEV VNLAVNSDQT FNYTRSSTYP TQIKPPKMLC  60
FGNYDHQTDV NRVEIGFSET AKKSAITCSS SSSVSSTSTA SISALPNSKN KRRNGLAPIS  120
CTTTPTTQRA TKRTKSENRS SAGNGKRKEK LGERITALQQ LVSPYGKTDT ASVLHEAMGY  180
IRFLQEQVQV LCSPYLQRLE PPSQPVPGGV GEVKQEAGRS DLRSRGLCLV PMEYTMHVAN  240
SNGADFWLPA MANTNINPVS SPSTNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.13e-46bHLH family protein