PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013919.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 372aa MW: 41546.8 Da PI: 8.2682

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013919.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.1	2.4e-55	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeel+++yL kkv + +++ ++i+evd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + PCP013919.1 15 LPPGFRFHPTDEELITYYLLKKVLDGSFTG-RAIAEVDLNKCEPWELPDKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkTC 111 79***********************999.89***********99999************************************97455 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 +lvg+kktLvfy+grapkgek++W+mheyrle PCP013919.1 112 ALVGMKKTLVFYRGRAPKGEKSNWIMHEYRLE 143 67**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDMNFSTHFD HDTYLPPGFR FHPTDEELIT YYLLKKVLDG SFTGRAIAEV DLNKCEPWEL 60 PDKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSSKT CALVGMKKTL 120 VFYRGRAPKG EKSNWIMHEY RLEGRFAYHY LSRSTKERQH LPLLIFHKKL TLLFTNVAHG 180 IDSHVQDEWV ISRVFQKSGS AANGLGSKKT RIGNGSTSSI SLYPEPSSPS SVSLPPLLDS 240 SPYQPVSAAG DGSSYDSPIS REHVSCFSTN PNKNGFNFSA SCFDLARPPP PQPQSFGGVS 300 AFPSLRSLQE NLQLPFFSPV PSHPPVHVGG SFAGGGSSVD CTGNWPPAPE EARAMGPTEL 360 DCMWNYYKTE CL

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDMNFSTHFD HDTYLPPGFR FHPTDEELIT YYLLKKVLDG SFTGRAIAEV DLNKCEPWEL  60
PDKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSSKT CALVGMKKTL  120
VFYRGRAPKG EKSNWIMHEY RLEGRFAYHY LSRSTKERQH LPLLIFHKKL TLLFTNVAHG  180
IDSHVQDEWV ISRVFQKSGS AANGLGSKKT RIGNGSTSSI SLYPEPSSPS SVSLPPLLDS  240
SPYQPVSAAG DGSSYDSPIS REHVSCFSTN PNKNGFNFSA SCFDLARPPP PQPQSFGGVS  300
AFPSLRSLQE NLQLPFFSPV PSHPPVHVGG SFAGGGSSVD CTGNWPPAPE EARAMGPTEL  360
DCMWNYYKTE CL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-101	NAC family protein