PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013723.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HB-other

Protein Properties

Length: 598aa MW: 68121.1 Da PI: 7.0275

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013723.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.8e-19	190	245	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ ql +Le+++++++yp++e++ +LA++l+L+e+q++ WF+ rR k+k+ PCP013723.1 190 KKRKLKTPAQLMALEKFYNEHKYPTEEMKSQLAEQLRLSEKQISGWFCHRRLKDKR 245 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MDNLVPEHLA LRRSEQVSKP PKKYGLDNDF GELHLLGDTD TNEDPKYYTE AMSYIDSKTW 60 QEDMKSEMDS MYQNQAWTLI DPLKDKVLNR FLMEQSKKGF LPVRHGIYLS KSMGPKTPEE 120 IRQMSAIPYA STIGSFMYAM ICTRPDIVYI CPAANPMANN FTKFYTNTDG YIESNELHSE 180 ENKNSQDNNK KRKLKTPAQL MALEKFYNEH KYPTEEMKSQ LAEQLRLSEK QISGWFCHRR 240 LKDKRLSRDE TQGNGRQDRS SGVIQDRASG LGQDSCGSTK HGEHRFIDPR EVESRRLSGH 300 DFAAADITRN YRSHYTERIG DMDNTSSESS SSLQDRLLTQ NEDPYDVETS RYLTHTKGME 360 NMGYKPSGFL KVKGEAENPA ITAVKRQLGR QYLEDGPLLG VEFDLLPPGA FESPIMDSGH 420 DVAFGTVSFI CFQCLICLDL EPSTLGNPVL RSPDISGVKG QLSPSTRYEV YNSRLNSQDS 480 YLQQENPSIM HGFDLQEKKS SKQLRQKSTF LNDTNPSPGK NSPLDIYDKP SGGISAYNSN 540 KKDRMRSKGY YGRKVTSEQT EPRLDEYDKF SNTKTVQRND YLKSRPSSSI VKHSETAL

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MDNLVPEHLA LRRSEQVSKP PKKYGLDNDF GELHLLGDTD TNEDPKYYTE AMSYIDSKTW  60
QEDMKSEMDS MYQNQAWTLI DPLKDKVLNR FLMEQSKKGF LPVRHGIYLS KSMGPKTPEE  120
IRQMSAIPYA STIGSFMYAM ICTRPDIVYI CPAANPMANN FTKFYTNTDG YIESNELHSE  180
ENKNSQDNNK KRKLKTPAQL MALEKFYNEH KYPTEEMKSQ LAEQLRLSEK QISGWFCHRR  240
LKDKRLSRDE TQGNGRQDRS SGVIQDRASG LGQDSCGSTK HGEHRFIDPR EVESRRLSGH  300
DFAAADITRN YRSHYTERIG DMDNTSSESS SSLQDRLLTQ NEDPYDVETS RYLTHTKGME  360
NMGYKPSGFL KVKGEAENPA ITAVKRQLGR QYLEDGPLLG VEFDLLPPGA FESPIMDSGH  420
DVAFGTVSFI CFQCLICLDL EPSTLGNPVL RSPDISGVKG QLSPSTRYEV YNSRLNSQDS  480
YLQQENPSIM HGFDLQEKKS SKQLRQKSTF LNDTNPSPGK NSPLDIYDKP SGGISAYNSN  540
KKDRMRSKGY YGRKVTSEQT EPRLDEYDKF SNTKTVQRND YLKSRPSSSI VKHSETAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-75	HB-other family protein