PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013681.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 468aa MW: 52923.7 Da PI: 6.8562

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013681.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	128.7	4.4e-40	61	190	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppG rF Ptd+el+++yL++k+ ++ ++++ i++++iy+++P++L +k++ e+ e+yfF++rdkky++g r++r++++g+Wkatg +k++ + PCP013681.1 61 PPGWRFCPTDQELISFYLTRKLMNNIyhpQPVNSRITDLHIYDFNPKKLAEKYQLpEDPEMYFFTPRDKKYPNGCRPSRTAADGFWKATGGNKNIRH- 157 9*******************9998666677677**********9666553666**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+++g k+tLvf+ g+++kg+ktdW+m+ey++ PCP013681.1 158 RGKTIGYKNTLVFFLGTQKKGTKTDWIMQEYTI 190 999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MASTSTNPSY SHSAPPAAAA LDGQEGGQQY HGHQHEHHHG RHDKEDPKQM MRNERLVLGI 60 PPGWRFCPTD QELISFYLTR KLMNNIYHPQ PVNSRITDLH IYDFNPKKLA EKYQLPEDPE 120 MYFFTPRDKK YPNGCRPSRT AADGFWKATG GNKNIRHRGK TIGYKNTLVF FLGTQKKGTK 180 TDWIMQEYTI RKYQPSDGPA PGDRDTKLDK WVLCKIYEHK KSKKNRKNGR VSDDDEDEIN 240 SSAALVLQGQ ESQDHPLLHK PLSPPRNNMN HDGPSTSYQA GQYNMINNNH SAYALNNGLM 300 SPLGSINGYG AHQDQVRHLA PMLHLPGQQV MQPIPLVHST NVNNQDGHAF NGIATYYNQS 360 TQYGFGDQSV PMYNNASQLN NNGYPSSIIS VDTMDQYWFN EPLTDFDFSF DAINEPLTDF 420 DFSFDAIGEG VPFGMPEVLP LSWMPHINPV SQSTKADEKS STTPTDNH

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MASTSTNPSY SHSAPPAAAA LDGQEGGQQY HGHQHEHHHG RHDKEDPKQM MRNERLVLGI  60
PPGWRFCPTD QELISFYLTR KLMNNIYHPQ PVNSRITDLH IYDFNPKKLA EKYQLPEDPE  120
MYFFTPRDKK YPNGCRPSRT AADGFWKATG GNKNIRHRGK TIGYKNTLVF FLGTQKKGTK  180
TDWIMQEYTI RKYQPSDGPA PGDRDTKLDK WVLCKIYEHK KSKKNRKNGR VSDDDEDEIN  240
SSAALVLQGQ ESQDHPLLHK PLSPPRNNMN HDGPSTSYQA GQYNMINNNH SAYALNNGLM  300
SPLGSINGYG AHQDQVRHLA PMLHLPGQQV MQPIPLVHST NVNNQDGHAF NGIATYYNQS  360
TQYGFGDQSV PMYNNASQLN NNGYPSSIIS VDTMDQYWFN EPLTDFDFSF DAINEPLTDF  420
DFSFDAIGEG VPFGMPEVLP LSWMPHINPV SQSTKADEKS STTPTDNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	6e-43	NAC family protein