PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013439.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 585aa MW: 65276.2 Da PI: 6.7858

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013439.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.4	4.8e-22	15	145	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 + +rFhPt++e ++L+kk+++++ ++ +++ +d k+ePw+Lp+ + + k wy Fs d +++++ r +r+tk+g+Wk g + +v PCP013439.1 15 AAIRFHPTEDEKA-DFLRKKMKNHNSQACLFLPVIDHRKYEPWELPEsmfpESPYQAKAWYSFSWCDYNSNNSPRFKRKTKQGFWKMNGGQGDVGP-- 109 568******99.9******999888**********9545553334789********************************88.. PP NAM 97 gelvglkktLvfy.....kgrapkgektdWvmheyr 127 ++ + k+tL+f +gr +k++ t+W mhey PCP013439.1 110 KHFTCKKRTLTFRkktfqEGRGSKSVTTSWKMHEYI 145 55677788888886666579999999*******5 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MTTTTTAQSV PDMVAAIRFH PTEDEKADFL RKKMKNHNSQ ACLFLPVIDH RKYEPWELPE 60 SMFPESPYQA KAWYSFSWCD YNSNNSPRFK RKTKQGFWKM NGGQGDVGPK HFTCKKRTLT 120 FRKKTFQEGR GSKSVTTSWK MHEYICIKPK RGSSPHQARD QQRGLVLCVL KYKPADSKSN 180 KKKLKATLIR GDLADGTGNR GYIASSSGDD EAATAAATNH MSPNTEDVLA YKQLEHDLLG 240 SGNQDDGEPG GGSSSEFNQS LRDMIQEFWW QLCPPAGEYL DSHFPLPEPP QPHQPPQLGN 300 APDVCSGELV DPGASGCITY NTDNQAATMN HMISDTEEIL AFKQLERDVF AGGNHDGGEP 360 GSGILTFGDG NDETGGWKFS DFNARAASDR FQELFPEMGE ILNSSSQPLQ PPQQHQPPRP 420 HQPQDYCPST LQPPLDTLPG NVSYVYGDCT RRQSLIPDNI SYLGYKNNIS TCDPNEQVSK 480 LNGVHDRATE EMFSEVREAA EYCIALHLPG KKTKTMSLKH TVLKQATIGF FHWSISSKPS 540 IKSPLGNGSA AATWLLESQI YYNNQAPMVM YRLLVLKFEV PSLME

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MTTTTTAQSV PDMVAAIRFH PTEDEKADFL RKKMKNHNSQ ACLFLPVIDH RKYEPWELPE  60
SMFPESPYQA KAWYSFSWCD YNSNNSPRFK RKTKQGFWKM NGGQGDVGPK HFTCKKRTLT  120
FRKKTFQEGR GSKSVTTSWK MHEYICIKPK RGSSPHQARD QQRGLVLCVL KYKPADSKSN  180
KKKLKATLIR GDLADGTGNR GYIASSSGDD EAATAAATNH MSPNTEDVLA YKQLEHDLLG  240
SGNQDDGEPG GGSSSEFNQS LRDMIQEFWW QLCPPAGEYL DSHFPLPEPP QPHQPPQLGN  300
APDVCSGELV DPGASGCITY NTDNQAATMN HMISDTEEIL AFKQLERDVF AGGNHDGGEP  360
GSGILTFGDG NDETGGWKFS DFNARAASDR FQELFPEMGE ILNSSSQPLQ PPQQHQPPRP  420
HQPQDYCPST LQPPLDTLPG NVSYVYGDCT RRQSLIPDNI SYLGYKNNIS TCDPNEQVSK  480
LNGVHDRATE EMFSEVREAA EYCIALHLPG KKTKTMSLKH TVLKQATIGF FHWSISSKPS  540
IKSPLGNGSA AATWLLESQI YYNNQAPMVM YRLLVLKFEV PSLME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	7e-14	NAC family protein