PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013438.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 454aa    MW: 50773.7 Da    PI: 6.395
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013438.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.43.3e-24251553127
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  + +rFhPt++e   ++L+kk+++++ ++  +++ +d++k+ePw+Lp+    +   + k wy Fs  d k++++ r +r+tk+g+Wk  g +++v    
  PCP013438.1  25 AAIRFHPTEDEKA-DFLRKKMKSHNSQACLFLPVIDVLKFEPWELPErmfpESPYQAKAWYSFSWCDYKSNNSPRFKRKTKQGFWKMNGDQRDVGP-- 119
                  568********99.9**********999888***************535553334788************************************88.. PP

          NAM  97 gelvglkktLvfy.....kgrapkgektdWvmheyr 127
                  +  +  k+tL+f      +gr++k++ t+W mhey 
  PCP013438.1 120 KYFTCKKRTLTFQkktfqEGRRSKSVTTSWKMHEYI 155
                  55567777888886666579999************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MRNISSSITT MTTPTIAQSA PDMVAAIRFH PTEDEKADFL RKKMKSHNSQ ACLFLPVIDV  60
LKFEPWELPE RMFPESPYQA KAWYSFSWCD YKSNNSPRFK RKTKQGFWKM NGDQRDVGPK  120
YFTCKKRTLT FQKKTFQEGR RSKSVTTSWK MHEYICIKPK RGSSPHQARD QQRGFVLCVL  180
KYKPADSKSN KKKLKATLIP GELADGTGNR GYIASRSGDD EAATAAATNH MSPNTEEVLA  240
YKQLEHDLLG SGNQDDGEPG GGSSSDFNQS LRDMIQEFWW QLCPPAGEYL NSHFPLPEPP  300
QPHLPPQLGN APEVCSGELV DPGTSGCTTY NTDNQAATMN HMVSDTEEIL AFKQLERDVF  360
AGGNHDGGEP GSGILTFGDG NDETGGWKFS DFDDRAASDM FQELFPEMGE ILNSSSQPLQ  420
PPQPHQPPQP HQPPQPHQPQ DYSPSSLQPP LHTM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.12e-20NAC family protein