PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP013078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 231aa MW: 26000.3 Da PI: 4.3986 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 98.5 | 9.9e-31 | 38 | 170 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 lp G+rF+Pt +e++v+yL +k+ ++ +++ + ikevd+y+++P++Lp+ +++a+ + y+F++r+ a + + + at+ gyWk ++evl PCP013078.1 38 LPLGYRFDPTGDEILVYYLFNKIMDRAMPTYDLIKEVDVYECDPNQLPNgdfRHTADFNAAYYFANREPFDACEGKIIKtATNGGYWKVIDDEEEVLF 135 699*********************************************5455555566688********999766655559***********999998 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ vg +++ fykg+ap+g+kt vm+eyrl PCP013078.1 136 EdSNVIVGFETVMKFYKGQAPNGTKTPFVMNEYRL 170 8456669**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MSSSMASSAS QSADENEGFD LLKCSTVQEG KKDAEIRLPL GYRFDPTGDE ILVYYLFNKI 60 MDRAMPTYDL IKEVDVYECD PNQLPNGDFR HTADFNAAYY FANREPFDAC EGKIIKTATN 120 GGYWKVIDDE EEVLFEDSNV IVGFETVMKF YKGQAPNGTK TPFVMNEYRL NPRVVPAHVL 180 NESIKNKIEK YVVCQIINKE VSNQPAIEYG QGLLELLQKS SAGTVEDGVP K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 2e-25 | NAC family protein |