PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012957.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 434aa MW: 46855.1 Da PI: 6.2521

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012957.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	275	323	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq PCP012957.1 275 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 323 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MGGHDSEDVG FQHRIDGSLN CPSSGMSMNP LPEKVSRTAM SSVSMFKPSN GADPFFGSGW 60 DPIVSLSQND NFGGPSGVSH GEFPNPPYPV AMENQGMSST SHLVQYPSDS SYVGMVPKLP 120 QCFGSGSFSE MVGSFGLSEC GQIANPGCPP NYNPNREGVT ERTSTIGAQS HDDRQISEEG 180 ALGSSPNGKR RKRVSKSNSA FSPNKNADGE LNKDMSGESS DYLKEQDEKK AKTEENAAAN 240 LRGKQMGKQT KENSQSGDPK DSYIHIRARR GQATNSHSLA ERVRREKISE RMRLLQELVP 300 GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NIDIERILSK DILNSRSGSG 360 AIFGFSPGIG SSHPYPPGMF PGNLPSMPTS APQFPSLPQN VLDNELQGLF HMGFDSSSAI 420 DNMGQNAGRL KPEL

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MGGHDSEDVG FQHRIDGSLN CPSSGMSMNP LPEKVSRTAM SSVSMFKPSN GADPFFGSGW  60
DPIVSLSQND NFGGPSGVSH GEFPNPPYPV AMENQGMSST SHLVQYPSDS SYVGMVPKLP  120
QCFGSGSFSE MVGSFGLSEC GQIANPGCPP NYNPNREGVT ERTSTIGAQS HDDRQISEEG  180
ALGSSPNGKR RKRVSKSNSA FSPNKNADGE LNKDMSGESS DYLKEQDEKK AKTEENAAAN  240
LRGKQMGKQT KENSQSGDPK DSYIHIRARR GQATNSHSLA ERVRREKISE RMRLLQELVP  300
GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NIDIERILSK DILNSRSGSG  360
AIFGFSPGIG SSHPYPPGMF PGNLPSMPTS APQFPSLPQN VLDNELQGLF HMGFDSSSAI  420
DNMGQNAGRL KPEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	9e-87	bHLH family protein