PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP012946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 261aa MW: 29295 Da PI: 7.7666 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 41 | 3.2e-13 | 127 | 157 | 26 | 56 |
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRakek 56 s+++++eLA+kl+L rqV vWFqNrRa+ k PCP012946.1 127 SRKQKQELARKLNLRPRQVEVWFQNRRARTK 157 789**************************98 PP | |||||||
2 | HD-ZIP_I/II | 90.4 | 2.1e-29 | 126 | 190 | 24 | 88 |
HD-ZIP_I/II 24 LeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 + ++K+elar+L+l+prqv+vWFqnrRARtk+kq+E ++e Lk+++++lkeen+rL+ke +eL+ PCP012946.1 126 SSRKQKQELARKLNLRPRQVEVWFQNRRARTKLKQTEAECELLKQCCETLKEENRRLHKELQELK 190 46799***********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGFDHEACNT GLGLSLGCQG NPDHHTNLQA FDLDHQKKKK IQLKYDHLLP ALTLGPSSGA 60 KIEAAKSDDH LHQVVYVQAQ EQASSPCSGA VSSFSNSSSF KRDRGLGVEE IEGEVEEERV 120 VNITTSSRKQ KQELARKLNL RPRQVEVWFQ NRRARTKLKQ TEAECELLKQ CCETLKEENR 180 RLHKELQELK LMKQTATAAA PFYMQFPTAT LTMCPSCEKI CNVGDHHNHN HNESSTSPFL 240 VGSNKNHLIF NPYSTHPSTA C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 160 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-45 | HD-ZIP family protein |