PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012727.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 274aa    MW: 30277.8 Da    PI: 6.0462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012727.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.72e-20128178255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +g+++AeIrdp++ng  +r++lg++ tae+Aa a+++a+ k++g
  PCP012727.1 128 HFRGVRRRP-WGKYAAEIRDPKKNG--ARVWLGTYETAEGAALAYDQAAFKMRG 178
                  69*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MFEDICLVSD FALLESIRQH LLDDNFDTTL QESSPTASGS PPPMHSQSLS FNTLFSTESW  60
MDMPFKVELD TNDIVGSLSD GTDGWSPSSD HHHVDVVETT PVKPKPWEIV REEVVVARET  120
HTPPSRQHFR GVRRRPWGKY AAEIRDPKKN GARVWLGTYE TAEGAALAYD QAAFKMRGSK  180
AKLNFPHLIG SEGCEPVRVT AKRRAPEFST SSSSSESGSP KPKRRNIGLR TAAEAESGST  240
SRVEMSQLAA VDQWLSDLNT TVSPMPHELL ISGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-47ERF family protein