PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012512.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 316aa    MW: 35224.6 Da    PI: 7.0237
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012512.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof110.67.4e-351772661
       zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                  +cprC  +ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+r+n++ 
  PCP012512.1 17 PNCPRCGCSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRRNRRG 72
                 58***************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MERAGWKPND DHHHTFPNCP RCGCSNTKFC YYNNYSLTQP RYFCKGCRRY WTKGGSLRNV  60
PVGGGCRRNR RGSKSLRLSA TTTSTTEGHA HHNTKKSRAS TYEGAHNSYG TNVLGDSTSP  120
SVTQDGSHID LALVYANFLK QKPDNSDSTT ESDHQLPKFP SEFNPATLDF SSMELNMNNA  180
SSDNTSTQLM DNHYHQNGLV GSLGFHTLSH DHLSTENCST NDRMYFGGLD PLIHHPEKHH  240
HQHTSEVVQY ASDFGLPLLP GQEALWSTTS QMMDSGSHTM QAGTSILGHE LHNPNLLMDG  300
WSPFDLPCNE TFSRST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15871RNVPVGGGCRRNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.15e-43Dof family protein