PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012487.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 279aa MW: 32111.3 Da PI: 7.4881

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012487.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.1	1.7e-53	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+++yLk +++++++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nrat sgyWkatg+dk+++s +++ PCP012487.1 9 LPPGFRFHPTDEELIMFYLKYQATSRPCPA-SIIPEVDIYKFDPWELPEKAEFGENEWYFFTPRDRKYPNGIRPNRATVSGYWKATGTDKAIYS-ESK 104 79**************************.89***********99999*************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy+gr pkg+k+dW+mheyrl PCP012487.1 105 YVGVKKALVFYQGRPPKGVKSDWIMHEYRL 134 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MEAKQSSQLP PGFRFHPTDE ELIMFYLKYQ ATSRPCPASI IPEVDIYKFD PWELPEKAEF 60 GENEWYFFTP RDRKYPNGIR PNRATVSGYW KATGTDKAIY SESKYVGVKK ALVFYQGRPP 120 KGVKSDWIMH EYRLGDTRNQ RANKQLGSMR LDDWVLCRIY KKRQLGKAYL DQKVEEDEKT 180 EMTTPETAKA NEEQTMLKFP RTCSITSLLD MDYMGPMSQL LSDNNSGYDF QSSLAGAGAG 240 HAQMFQFGEM PNYQTTTDSG KFQAMAQTSV LNHQPWFGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-114	NAC family protein