PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011986.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 316aa    MW: 34467.2 Da    PI: 9.3473
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011986.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.17.6e-3251107358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                   v YkeClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFH r+++
  PCP011986.1  51 VVAYKECLKNHAASLGGHALDGCGEFMPSPSSNpADPTSLKCAACGCHRNFHCRDQH 107
                  689******************************9******************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDFTTVNATI QTPDTDTEPP SPSDPKFNFF SGRSLSFTSG AFQPRPTRTR VVAYKECLKN  60
HAASLGGHAL DGCGEFMPSP SSNPADPTSL KCAACGCHRN FHCRDQHRPK NNAPKTAHNN  120
QSSSSSSSPN PTLSPQSPPP VSHLPPSYFA SPPQMLLALS SGFSGPPDEH PHQRQRQHQL  180
NPTAVMKTEK YPSEKKRSRT KFSQEQKEKM SSFAEKVGWR VQKSDERSVE DFCSEVGIGR  240
GVFKVWMHNN KHGLRRRLER SGGVGGGGNM IINSNVSEIN GEGERLGFDS MNAHIADNNV  300
NANPLHLSNN GSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.13e-59ZF-HD family protein