PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011502.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 272aa    MW: 31298.2 Da    PI: 5.0912
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011502.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.23.7e-1087133100
                  -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
           B3  33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                  s  ++l+ +sg +We++l  r+++g+++++kGW +F +   L+    +vF  +g+s+f  +v++f++s
  PCP011502.1   8 SNSVVLKVPSGLEWEMEL--RRYDGEVWFEKGWPDFSHFYSLDFAYWLVFGCEGNSKF--LVRIFDRS 71 
                  6689**************..*******************************9999999..*****985 PP
2B3611.9e-19176261188
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                  f+kv +++ +l+ + l+l  kf+++h + k+++  + l+ ++gr+W+vkl  +   gr+ l +GWk+Fv++n L  gD++vF l+++ +
  PCP011502.1 176 FLKVAMQPTYLQYCYLSLRSKFVKKHLS-KTCD-HVFLRRSDGRTWRVKLE-QYETGRCRLLSGWKKFVQENSLAIGDVCVFVLIDNiK 261
                  899***********************54.4565.9***************3.33334477889********************998644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MKYGDGLSNS VVLKVPSGLE WEMELRRYDG EVWFEKGWPD FSHFYSLDFA YWLVFGCEGN  60
SKFLVRIFDR SCTEIDYPLQ TPEEEETDED SISTNSDHDS SDDARDDYEA YSGDDSVQIL  120
DEFSPCQRET KGRSPLPCPR PYKENITSSG GKAGPSARAK AKALQMVSSF TSEYPFLKVA  180
MQPTYLQYCY LSLRSKFVKK HLSKTCDHVF LRRSDGRTWR VKLEQYETGR CRLLSGWKKF  240
VQENSLAIGD VCVFVLIDNI KPLFNVIFFP TA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.12e-17B3 family protein