PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010931.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 296aa    MW: 35400.8 Da    PI: 8.5055
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010931.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.35.5e-2553135186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +W+ qe+++L+ +r e+++++ ++k++k lWe +s +m+e+g +rs++qCk+kw+nl +ryk ++++e +     ++++p++++l+
  PCP010931.1  53 QWSVQETKDLLLIRAELDQTFMETKRNKLLWEVISTRMKEKGHHRSAEQCKCKWKNLVTRYKGCETMEPEA---MRQQFPFYNELQ 135
                  7********************************************************************95...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEHHPHHFQH HHQQQHHPQQ LQLQLQQQQQ QQLQQQHPST ATVQVDASDR FPQWSVQETK  60
DLLLIRAELD QTFMETKRNK LLWEVISTRM KEKGHHRSAE QCKCKWKNLV TRYKGCETME  120
PEAMRQQFPF YNELQAIFAA RIQRMLWAEE SGAASGSKKK TLSSDDEEDN EDSEAENKGS  180
TARNKKKKVK MSNIGSSGTS GSASGNNVRE ILEGFMKQQM QMEMQWREEF QARENERRLK  240
EMEWRQRMEA LENERIMMET RWREREEQRR LREEARAEKR DALITALLNK LRREDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.16e-56Trihelix family protein