PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010817.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 355aa    MW: 38597.2 Da    PI: 9.5795
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010817.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-18222255134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs C+t++TplWR+gp+g+k+LCnaCG+++rk +
  PCP010817.1 222 CSDCNTSTTPLWRSGPRGPKSLCNACGIRQRKAR 255
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MMTPVYLNPP SSPFSHVEQA NDQDQRLKLF ISSSYTNQAA ASSCSSLISS FPTFFDSFED  60
QRAGSSSTTT TTTTLGHGQS LLYHHKVDKH IRDCGTSIYD QASSSSSLVQ PHVVDVISNK  120
DHRLMSAYAD HEREINGRGG EEEGKSNNNI RPRAVKWMSS KMRLMEKMTN PDLGPAGTTG  180
NHIPAAAEIA EHKFRVVQYQ ENSDETSFSR NSNKTTPAVR VCSDCNTSTT PLWRSGPRGP  240
KSLCNACGIR QRKARRAMAE AAAAAANGFV VGATDTSSAK GKVANKEKKP RGSHSKNKSK  300
LIVTDTPSVS PNNKINSNNN KICFKGLGFQ RVFPQDVAEA AILLMELSCG LINHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-17GATA family protein