PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009353.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 406aa MW: 45402.4 Da PI: 4.3165

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009353.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.7	6.1e-16	8	151	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk.sgy 82 ppG+rF+Ptd+el+ +L+ + +++ + +++++ +++ +k++P+++ + +++a ++ +yfFs+ +k +++g++ r++ g+ PCP009353.1 8 PPGVRFKPTDQELIGTFLHYFLLKTPrllplPPHNTFMHMCNLfgNKSQPSQIWEafgggaalQLAAADQpALYFFSELKKITPNGSNVDRKMGlGGT 105 9*****************9999999988734434577777623689*74478888774444444488***************665599 PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 W+ + v + +++ +glk+t+ + + + + + W ++ey+l PCP009353.1 106 WEGKSVPAWVEGTegNSTCIGLKRTFWYKN--EGSEDHGGWKLDEYSL 151 88888888776556666***9973..3333589*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MENHSLFPPG VRFKPTDQEL IGTFLHYFLL KTPRLLPLPP HNTFMHMCNL FGNKSQPSQI 60 WEAFGGGAAL QLAAADQPAL YFFSELKKIT PNGSNVDRKM GLGGTWEGKS VPAWVEGTEG 120 NSTCIGLKRT FWYKNEGSED HGGWKLDEYS LFASPRKRNS HTGYDFDFVL CRLRNTSGIN 180 KRKCSTSSSQ DDEVPKMKKQ RPNEEIEQNM HAINVEEEGR QGNYSCLTSD SVVSYQENNE 240 FAVGDYVDYG YDDNDLRLTI TVAELDKILA KEPTDGSVEA LFPTASASEE LLLGKERQEV 300 PLSVSSTVVV AHGEVEDEAL NPNMLEELIP ETRELPLPAS SGTAEDGTVE EKAWDPSLLE 360 QYWLAETQEE EPLNPSFYRD SMFADGGVEE AYHPSAFDNV VDQSLF

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MENHSLFPPG VRFKPTDQEL IGTFLHYFLL KTPRLLPLPP HNTFMHMCNL FGNKSQPSQI  60
WEAFGGGAAL QLAAADQPAL YFFSELKKIT PNGSNVDRKM GLGGTWEGKS VPAWVEGTEG  120
NSTCIGLKRT FWYKNEGSED HGGWKLDEYS LFASPRKRNS HTGYDFDFVL CRLRNTSGIN  180
KRKCSTSSSQ DDEVPKMKKQ RPNEEIEQNM HAINVEEEGR QGNYSCLTSD SVVSYQENNE  240
FAVGDYVDYG YDDNDLRLTI TVAELDKILA KEPTDGSVEA LFPTASASEE LLLGKERQEV  300
PLSVSSTVVV AHGEVEDEAL NPNMLEELIP ETRELPLPAS SGTAEDGTVE EKAWDPSLLE  360
QYWLAETQEE EPLNPSFYRD SMFADGGVEE AYHPSAFDNV VDQSLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01520.1	3e-07	NAC family protein