PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008898.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 395aa    MW: 45172.8 Da    PI: 6.571
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008898.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.32.4e-09179354128
          NAM  54 eekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++++yfF+k + +++  tg+r  r++ sg+ + + k  ev++  +++++g  k +++ + + p+ e+  W+mhe+rl
  PCP008898.1  17 DDEDLYFFTKLKPASTkgTGSRVARTIGSGTRHGQNKGSEVKDPkTKKTIGWWKRFTYANTKYPQ-ENGCWIMHEFRL 93 
                  56789****998877633688********************99867788**********988888.8999******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MEARDIWNNN GGQDLGDDED LYFFTKLKPA STKGTGSRVA RTIGSGTRHG QNKGSEVKDP  60
KTKKTIGWWK RFTYANTKYP QENGCWIMHE FRLDRKLAMR IKSNSRTSDG DEYVVCRVRK  120
NYDRKRKAVD HEQTRVVESQ RNKIQRQFEN IDESYATPPS SEVVDKVNTD HCPQQQQPQQ  180
EQQTNLNANS TSSSIGVTNV DRRKYDYYED HPKCYEPQNS HVSLISSVVV EVNVDPYYNQ  240
QQLQLCNVTK FPQYYYESQE PMARPDDFVA EAACPTMPSS LGMANQEEYL QHNGFVNNRT  300
DLPQYDYSST QDPSSGTVFC HYDPPQTATT GFANQPHHIV TQDQPNYFVA DPTVASSLAS  360
PANIDQNHPI MSDKNQHPLL NLTTHNFMKP TVMTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.12e-10NAC family protein