PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008887.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 573aa MW: 64512.7 Da PI: 4.5018

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008887.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.1	1.2e-51	18	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +pGfrFhPtdeelv +yLk+k+ +k+l++ +vi+e+d+yk++P++Lp+ +k+++++w+fFs+rd+ky++g r++rat++gyWkatgkd+++++ + PCP008887.1 18 APGFRFHPTDEELVLYYLKRKICKKRLKI-DVIAETDVYKWDPEELPElsLLKTGDRQWFFFSPRDRKYPNGGRSSRATRHGYWKATGKDRNIVC-YS 113 69*************************.99**********9445788899***********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vglkktLv+ykgrap+ge+tdWvmhey++ PCP008887.1 114 RSVGLKKTLVYYKGRAPSGERTDWVMHEYTM 144 99*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MVTEDDPAAL FCDGHFAAPG FRFHPTDEEL VLYYLKRKIC KKRLKIDVIA ETDVYKWDPE 60 ELPELSLLKT GDRQWFFFSP RDRKYPNGGR SSRATRHGYW KATGKDRNIV CYSRSVGLKK 120 TLVYYKGRAP SGERTDWVMH EYTMDEEELK RCQNVQQYYA LYKVYKKSGP GPKNGEQYGA 180 PFREEDWVDD ESPVIKTSAD CQISVKEAVD VVSIDNVKGN GEVHYAPDDI EEFMKQMADE 240 AVLPQMNGYG YTAPQVVSEE DTQSGLVDLY SREVFDPELI KEFNPNVQQC NVEANFDFTQ 300 SATSQMQSHE ASEVTTAVPD IYEHGPPALH EEDFLEMDDL LGPESTVPNT LNPVDDLQFG 360 ELDGLSEFDL YHDAAMFLHD LGPFDEGNVS HHQYMNSQGN NIVDQFEYHL QPNPAAENQV 420 NHILNPELTQ MNNQLWTNTE RTEPNQGSLS YSTSGVVYES SNLPSRATQN QIGNEAAGAT 480 SQFSSALWAF VESIPTTPAS ASESALVNRA FERMSSFSRL RINTASTTAG NGSETMRAGI 540 KRGFFFLPVL VALCAIFWIL MATLRPPGRC LPA

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MVTEDDPAAL FCDGHFAAPG FRFHPTDEEL VLYYLKRKIC KKRLKIDVIA ETDVYKWDPE  60
ELPELSLLKT GDRQWFFFSP RDRKYPNGGR SSRATRHGYW KATGKDRNIV CYSRSVGLKK  120
TLVYYKGRAP SGERTDWVMH EYTMDEEELK RCQNVQQYYA LYKVYKKSGP GPKNGEQYGA  180
PFREEDWVDD ESPVIKTSAD CQISVKEAVD VVSIDNVKGN GEVHYAPDDI EEFMKQMADE  240
AVLPQMNGYG YTAPQVVSEE DTQSGLVDLY SREVFDPELI KEFNPNVQQC NVEANFDFTQ  300
SATSQMQSHE ASEVTTAVPD IYEHGPPALH EEDFLEMDDL LGPESTVPNT LNPVDDLQFG  360
ELDGLSEFDL YHDAAMFLHD LGPFDEGNVS HHQYMNSQGN NIVDQFEYHL QPNPAAENQV  420
NHILNPELTQ MNNQLWTNTE RTEPNQGSLS YSTSGVVYES SNLPSRATQN QIGNEAAGAT  480
SQFSSALWAF VESIPTTPAS ASESALVNRA FERMSSFSRL RINTASTTAG NGSETMRAGI  540
KRGFFFLPVL VALCAIFWIL MATLRPPGRC LPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	45	KRKICKKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-156	NAC family protein