PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008374.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 458aa MW: 49707.4 Da PI: 6.7121

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008374.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	6.8e-16	239	295	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L e + L ++l ++++++ PCP008374.1 239 DVKRARRMLSNRESARRSRRRKQAQMGELETQVGQLRVEHSGLLERLTDVNQKYDNA 295 68******************************************9999999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MHSVFTADDS SDTFWALSPP AEMNRSASEW AFEQFLDEFT TPAATPRQSV AEQFPVSSAA 60 SCSVASQSST SKRDHVDEEV VEIKKPDRHR RRQLQPPQQL NHPSPPAALD PAPTAPINSD 120 QYREFLKNQL DLACAAVALS RASSLTPVDL GNLAENPSLV SKPSQLAPTR SLDKDAGNAL 180 PVPQNEADTS PLGVSALPAA QRRTPVLSKQ TTSGSSKEDS DDDDLEGDIE INDNMDPSDV 240 KRARRMLSNR ESARRSRRRK QAQMGELETQ VGQLRVEHSG LLERLTDVNQ KYDNAAVDNR 300 ILRADIETLR AKVKMAEESV KRVTGINPLL LAMSNAANAG MPPVSNPMNA STNAAVPMQP 360 NSNRLFHPGV PSMTATPLHH QRLETGFHAN SPISLVGNRQ GNAGQPVITG SNMAHNSSMP 420 HTGNTDHMPQ QQQPRPGVGE ALPGWDPQLP HAVPKNKK

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MHSVFTADDS SDTFWALSPP AEMNRSASEW AFEQFLDEFT TPAATPRQSV AEQFPVSSAA  60
SCSVASQSST SKRDHVDEEV VEIKKPDRHR RRQLQPPQQL NHPSPPAALD PAPTAPINSD  120
QYREFLKNQL DLACAAVALS RASSLTPVDL GNLAENPSLV SKPSQLAPTR SLDKDAGNAL  180
PVPQNEADTS PLGVSALPAA QRRTPVLSKQ TTSGSSKEDS DDDDLEGDIE INDNMDPSDV  240
KRARRMLSNR ESARRSRRRK QAQMGELETQ VGQLRVEHSG LLERLTDVNQ KYDNAAVDNR  300
ILRADIETLR AKVKMAEESV KRVTGINPLL LAMSNAANAG MPPVSNPMNA STNAAVPMQP  360
NSNRLFHPGV PSMTATPLHH QRLETGFHAN SPISLVGNRQ GNAGQPVITG SNMAHNSSMP  420
HTGNTDHMPQ QQQPRPGVGE ALPGWDPQLP HAVPKNKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	254	261	RRSRRRKQ
2	256	261	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54620.1	4e-50	bZIP family protein