PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007566.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 348aa MW: 38029.1 Da PI: 5.4401

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007566.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.2	2.3e-15	179	227	3	54
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++kr rrk +NRe+ArrsR+RK+a ++ Le v++L +eN++L +l++ PCP007566.1 179 DIKRIRRKVSNRESARRSRRRKQAHLADLELQVEQLRGENSTLHR---QLTD 227 58*****************************************94...4444 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEQKPRYHVD VYSQTASSPL ELKRSPSEVC LGEALEYLLE KPMIGQEAAD TQGHRDEKFG 60 ELRARDRSFA DTDVFFGDVC AGDHSFAFQN RDIMNGFSSS QLTETLLCTQ NLTPKNSCIS 120 AAMDSQSSIC VGSPTSAAKP IGGDNQTRGA YSGSSGEQSD EDDFEIEVSP CGDSTEPLDI 180 KRIRRKVSNR ESARRSRRRK QAHLADLELQ VEQLRGENST LHRQLTDAFQ QFRNADTNNR 240 VMKSDVEALR AKVKLAEDMV ARGSMTSSFN QILQGHLGTQ PLNPQNLRGV AAHVSPTITI 300 HGEDAPYAGI AVSGQNASFG LGNAGMANSN LSNRMMSDTV SCVSDLWS

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEQKPRYHVD VYSQTASSPL ELKRSPSEVC LGEALEYLLE KPMIGQEAAD TQGHRDEKFG  60
ELRARDRSFA DTDVFFGDVC AGDHSFAFQN RDIMNGFSSS QLTETLLCTQ NLTPKNSCIS  120
AAMDSQSSIC VGSPTSAAKP IGGDNQTRGA YSGSSGEQSD EDDFEIEVSP CGDSTEPLDI  180
KRIRRKVSNR ESARRSRRRK QAHLADLELQ VEQLRGENST LHRQLTDAFQ QFRNADTNNR  240
VMKSDVEALR AKVKLAEDMV ARGSMTSSFN QILQGHLGTQ PLNPQNLRGV AAHVSPTITI  300
HGEDAPYAGI AVSGQNASFG LGNAGMANSN LSNRMMSDTV SCVSDLWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	200	RRKVSNRESARRSRRRK
2	194	201	RRSRRRKQ
3	196	201	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-55	bZIP family protein