PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007561.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 301aa MW: 34715.9 Da PI: 8.2546

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007561.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.1	2.1e-50	26	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 + pG+rFhPtdeelv +yL++kve+k+++l + ik+vdiyk++PwdLpk ++++kewyfF++r +ky+++ r+nr+tksg+Wkatg dk+v+s PCP007561.1 26 MLPGYRFHPTDEELVRFYLRRKVENKPIRL-DLIKHVDIYKYDPWDLPK--ESGDKEWYFFCRRGRKYRNSIRPNRVTKSGFWKATGIDKPVYSVgdF 120 579*************************.99***********4..4689***********************************8555 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl PCP007561.1 121 HNCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 152 566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MEEVDQKMMS ASDSNNMIYK NQDANMLPGY RFHPTDEELV RFYLRRKVEN KPIRLDLIKH 60 VDIYKYDPWD LPKESGDKEW YFFCRRGRKY RNSIRPNRVT KSGFWKATGI DKPVYSVGDF 120 HNCIGLKKSL VYYRGSAGKG TKTDWMMHEF RLPASSNNDT SIKNSTQEAE VWTLCRILKR 180 DHTSCGKYTS NNWRMTTLNP KQSVAGSSSK TCSSESDATF GALAANDQSE RSPLFNNVHT 240 YEGNQFSLGW LSLNDDVNNP NSCMSFPNTP NEEMLTSNGN WDELRPMVDC VLNPSLLYSY 300 M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	3e-90	NAC family protein