PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP007285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | bHLH | ||||||||
Protein Properties | Length: 220aa MW: 25079.3 Da PI: 7.0783 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 6.9e-09 | 17 | 62 | 6 | 53 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 +E++RR++++ +++L +llP+ + p++ ls e +A++YIks PCP007285.1 17 RVVEKNRRNHLKLLYSKLYSLLPNqN---PKEQLSVNEQIDEAINYIKS 62 679*********************55...9999**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MNNNQASQSS STKVERRVVE KNRRNHLKLL YSKLYSLLPN QNPKEQLSVN EQIDEAINYI 60 KSKESKLQKA KEKKESLTGT RKRSNATAFV NVESMEPKTL NIESARSTKA PQIQIHETGS 120 TVEVVLTSGL DNHQFIFYEI IRILDEEQAD VVHASFSTLG DTIFHVVRAE MDKSMLDFGA 180 ARITEKLNRF VNGSISDQEL RQDCFWDFKF EPAAIIGDQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-18 | bHLH family protein |