PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007266.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 263aa MW: 30431.2 Da PI: 9.1934

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007266.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.7	9.8e-36	16	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 +p+G+rF+Ptdeelv +yL +kv++ +l++ ++i+e+d+++++Pw Lp v +++ yfF +++ +++ g +++ra+ gyWk gk+k+++++ + PCP007266.1 16 MPVGYRFRPTDEELVIHYLMRKVHAAPLPA-SIIPEFDVFETHPWGLPGDV---REKRYFFYNENMNKNVGINSRRAAGCGYWKPIGKKKQIVNNseS 109 699*************************.89***********554...3467888888888889*******************98767 PP NAM 97 gelvglkktLvfy...........kgrapkgektdWvmheyrl 128 +e+vg++ktLvf + ++ ++++t+W+mheyrl PCP007266.1 110 NEAVGIRKTLVFCerkrrrcrhhhHRSTDTTTQTRWLMHEYRL 152 778******7776666554335666778*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MENIRENYVI NGGVKMPVGY RFRPTDEELV IHYLMRKVHA APLPASIIPE FDVFETHPWG 60 LPGDVREKRY FFYNENMNKN VGINSRRAAG CGYWKPIGKK KQIVNNSESN EAVGIRKTLV 120 FCERKRRRCR HHHHRSTDTT TQTRWLMHEY RLLASQANPT QVLEKESGNW VVCRIFQKKR 180 RPTQRTSDDM GVVSERSSNC NKTRRLMGDY ISADDHSRRS DPDLTTLSSP SCSSDITREF 240 SSNDNGELDD DQEGHSVSMP INI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	128	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-45	NAC family protein