PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005894.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 346aa MW: 36815.7 Da PI: 8.4821

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005894.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.9	4.6e-38	61	119	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg rkn+++ PCP005894.1 61 TENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGYRKNRSV 119 67899***************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MIQELFGGAG LSNIEGGERK SFTFHGGTTC SPSLSPSPSP SSSTTTTATA TTTITAGLSN 60 TENLRCPRCD SSNTKFCYYN NYNLTQPRHF CKTCRRYWTK GGALRNVPIG GGYRKNRSVT 120 GSTASIGKTA AGKLKTVVSE IGRSGFGGGF DQEVQASPIL WGSPQNSHLL ALLKASHHQN 180 PNPNQLCNSV NVKEEGGMNM IGSHMMTTEA IAMNTARTLG LDPVCQAPSL GLCSSFGRNN 240 NQNHPPPSHH QHQQNGFIVG HEVQSSNIGI QELFQRLTPS TSQSGSYYSD QLNNVVASSS 300 SSSLSSYSTS SILDSSPAVG GGEMGYWNPA FTAWSFDLPT TNGAYH

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MIQELFGGAG LSNIEGGERK SFTFHGGTTC SPSLSPSPSP SSSTTTTATA TTTITAGLSN  60
TENLRCPRCD SSNTKFCYYN NYNLTQPRHF CKTCRRYWTK GGALRNVPIG GGYRKNRSVT  120
GSTASIGKTA AGKLKTVVSE IGRSGFGGGF DQEVQASPIL WGSPQNSHLL ALLKASHHQN  180
PNPNQLCNSV NVKEEGGMNM IGSHMMTTEA IAMNTARTLG LDPVCQAPSL GLCSSFGRNN  240
NQNHPPPSHH QHQQNGFIVG HEVQSSNIGI QELFQRLTPS TSQSGSYYSD QLNNVVASSS  300
SSSLSSYSTS SILDSSPAVG GGEMGYWNPA FTAWSFDLPT TNGAYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-34	Dof family protein