PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005850.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 476aa MW: 52790.1 Da PI: 8.8919

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005850.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	84	1.5e-26	260	311	3	53
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEE CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYe 53 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYe PCP005850.1 260 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYE 311 99**********************988********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MAVDFMGYRN TSSNSSFSVK LEENAVQEAA SGLESVEKLI RLLSQAQQNR HQEKYPSTAM 60 DMDCRAVADV AVSKFKKVIS LLGRTRTGHA RFRRAPLTLT SGSSFQPQYQ SHSQDIVVKQ 120 APLESTEVYH ATPIQQIPPP HHHHHSMVLE STMDSSNTIN FSYSAATSFM SSLTGDSDSK 180 QPMSSSAFQI TNLSQVSSAG KPPLSSTSLK RKCGSENLGS GKCGVGSSGR CHCSKKRKLR 240 QKRVVRVPAI SLKMADIPPD DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL 300 DDPAMLVVTY EVVYVRYFLM DLPSLGSLRL PPVMTYGSVL PFLCPARSYH GCGTRCLFLA 360 DELAAHGYAW RRLPIDIEFE RFYFLLDLIL LGDGTLVVSS GSSQVYAAFS AGYVTHHLSL 420 ANEQVDRGCA RHWVPFELEL ENSRVSLCFY VACSDIRWKE LHASYVENEH CAGVGP

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MAVDFMGYRN TSSNSSFSVK LEENAVQEAA SGLESVEKLI RLLSQAQQNR HQEKYPSTAM  60
DMDCRAVADV AVSKFKKVIS LLGRTRTGHA RFRRAPLTLT SGSSFQPQYQ SHSQDIVVKQ  120
APLESTEVYH ATPIQQIPPP HHHHHSMVLE STMDSSNTIN FSYSAATSFM SSLTGDSDSK  180
QPMSSSAFQI TNLSQVSSAG KPPLSSTSLK RKCGSENLGS GKCGVGSSGR CHCSKKRKLR  240
QKRVVRVPAI SLKMADIPPD DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL  300
DDPAMLVVTY EVVYVRYFLM DLPSLGSLRL PPVMTYGSVL PFLCPARSYH GCGTRCLFLA  360
DELAAHGYAW RRLPIDIEFE RFYFLLDLIL LGDGTLVVSS GSSQVYAAFS AGYVTHHLSL  420
ANEQVDRGCA RHWVPFELEL ENSRVSLCFY VACSDIRWKE LHASYVENEH CAGVGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.1	3e-74	WRKY family protein