PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005209.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 361aa MW: 40510.6 Da PI: 7.8983

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005209.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.9	2.7e-55	17	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPt+eel+++yL+kkv ++++++ ++i evd++k+ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++ PCP005209.1 17 LPPGFRFHPTNEELISHYLHKKVIDTSFSC-KAIGEVDLNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-GKS 112 79**************************.88***********888999************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfykgrapkgek++Wvmheyrl PCP005209.1 113 LVGMKKTLVFYKGRAPKGEKSNWVMHEYRL 142 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MENVPAGILE EDDQIDLPPG FRFHPTNEEL ISHYLHKKVI DTSFSCKAIG EVDLNKSEPW 60 ELPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATEAGYWKA TGKDKEIYRG KSLVGMKKTL 120 VFYKGRAPKG EKSNWVMHEY RLDGKFSVHN LPKTAKNEWV ICRVFEKNSG GKKTHFSGFV 180 SLGSLGNEIG PSGLPPLMDS SPYSAAKAKP ASESHYVPCF SNPDPTDVQG NQGNIVDYMN 240 NNTLFGVSSN TSNSFPIIPF PNSFYSADNA PISPNFQFPC SNLLQDQSIR RALFENNAAN 300 MRQPSFKTER EMVSVSQETG LTSDMNTEIP SVMSNLNMAR RPFGVQDPPA AAAGLDNFWN 360 Y

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MENVPAGILE EDDQIDLPPG FRFHPTNEEL ISHYLHKKVI DTSFSCKAIG EVDLNKSEPW  60
ELPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATEAGYWKA TGKDKEIYRG KSLVGMKKTL  120
VFYKGRAPKG EKSNWVMHEY RLDGKFSVHN LPKTAKNEWV ICRVFEKNSG GKKTHFSGFV  180
SLGSLGNEIG PSGLPPLMDS SPYSAAKAKP ASESHYVPCF SNPDPTDVQG NQGNIVDYMN  240
NNTLFGVSSN TSNSFPIIPF PNSFYSADNA PISPNFQFPC SNLLQDQSIR RALFENNAAN  300
MRQPSFKTER EMVSVSQETG LTSDMNTEIP SVMSNLNMAR RPFGVQDPPA AAAGLDNFWN  360
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-146	NAC family protein