PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005183.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 360aa    MW: 40353.9 Da    PI: 6.5169
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005183.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.6e-063685154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +r  ++erEr+ R+  N+ f eL + l  +    ++   Ka+iL +A++ +k+L
  PCP005183.1 36 KRIHKSERERKKRECFNEHFLELADALELN----QQNSGKASILSEATRLLKDL 85
                 68899***********************98....56677899******999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MGSQDPVPAA GKGNVATEAS VRKACPGIKK QGKIPKRIHK SERERKKREC FNEHFLELAD  60
ALELNQQNSG KASILSEATR LLKDLFGQIE CLQKENASLL SESNYMTLEK NELRDDNSAL  120
ETQIEKLQSE IQERVAQSKP DLNAPPCTEL RPEVASHFTG NCIGFPTQEP GLQQPPAVFV  180
MPVGPDLQAY PQPDVAHLTS NTTSHVSKPH ARYPTSVDSW PSQLLGEKPT AGKGFRQIRE  240
NDPSIMPVVS LAYPLYASIR AIETQSPADD RQWLTYWILY SMITLVELTF AKVIEWIPIW  300
SYAKLIAYFL VGPPIHEWRC ANQDDVLAVA EKYIAENGIE AFEKIIHRAD NNQRGRGIRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.21e-66bHLH family protein