PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25961 Da PI: 8.2701 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 94 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+A a+++a+ k++g PCP004783.1 94 HFRGVRRRP-WGKYAAEIRDPKKNG--ARIWLGTYETAEDAGLAYDRAAFKMRG 144 69*******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MSTESFSSSN WAFLESIRQH LLHDDLETQE TFLANVAQLD APLHNSPSTS SSSSAHFVVE 60 GSGNTMGVMN HALETSNKFE LAAGAVQSPF CGRHFRGVRR RPWGKYAAEI RDPKKNGARI 120 WLGTYETAED AGLAYDRAAF KMRGSKAKLN FPHLIGTHDS EPGRVAPKRC SPEPLSSSVS 180 SSDGSGSPML KRRRNVVSSA AKAKLQVADE QLQLNSFSFG SHLLLNELYT FDDLFAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 5e-45 | ERF family protein |