PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004571.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 306aa    MW: 34711.4 Da    PI: 5.1171
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004571.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-135594344
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +++ eE+   +++ +q+G++ W++Ia +++ gRt++++k++w
      PCP004571.1 55 KFSVEEERMVIELQAQFGNK-WARIATYLP-GRTDNDVKNFW 94
                     799*****************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEGRGRRSAI EPCEEMRTKR LELHSIQGPL AANRKVLPAP LGFEKWVGGF RCGCKFSVEE  60
ERMVIELQAQ FGNKWARIAT YLPGRTDNDV KNFWSSRQKR LARILQTPTA ATFSSKSHKT  120
RREVSVFHEL PTLQAPKFNC SSEGEPSTQV PSCSSPPPYI WNSEIIKMVP LLDIVKPESI  180
CFKTNPVQHE LTITDKDTRN ESQSVIPFLQ NPQPQTDLFS SETQELLATF DPYFDMLVPL  240
DASELGNGEP LPMEPPLFEP VGSCVSCERE QIDHTMAPDC LLDDFPTDMF DQLDHFRTHQ  300
GSIDRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.17e-40MYB family protein