PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004275.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 705aa MW: 77337.8 Da PI: 7.237

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004275.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.5e-09	401	438	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PCP004275.1 401 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 438 554459******************************88 PP
2	BELL	119.6	1.4e-38	265	336	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kk kL+++l+eVd+rY+qy+ q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkd i++qi PCP004275.1 265 ERQEIQMKKGKLINMLDEVDQRYRQYHRQMQMVISSFEQAAGIGSARTYTALALQTISKQFRCLKDSITNQI 336 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MATYFHHHRG NSSEIQASSD SALQTLVLMN PAYVPYSDTP PPPQQQQQQP QTPPAATNLV 60 FLNSAANSLT HHPSTLSHAP PSHHQQFVGI PLTQDPNSNS SQSMHHPHHD ISTLHAFMPR 120 IQTQYALWNS IDPTAAARDT PRAQQGLSLS LSSQQPGFGS FQGGATEREV PSGEDIRVSS 180 GSNSSASGVT NGVSGMQSVL LSSKYLKAAQ ELLDEVVNVG NGMRTELPKK GNGQQSKAAA 240 ESAAGDGLVG GEGSGKRASE LSTAERQEIQ MKKGKLINML DEVDQRYRQY HRQMQMVISS 300 FEQAAGIGSA RTYTALALQT ISKQFRCLKD SITNQIRTAN KSLGEEDSVG GKIEGSRLKY 360 VDHQLRQQRA LQQLGMIQHN AWRPQRGLPE RSVSVLRAWL FEHFLHPYPK DSDKHMLAKQ 420 TGLTRSQVSN WFINARVRLW KPMVEEMYME EVKEQEQNGS SEKMSKSNED SASKSTAPQD 480 AENQTTSTFN FKQENSVNHN LAAHPSISIS QASTSPTNMV RNQSGFTLIG SSELDGITQA 540 SPKKPRSTEI MHSSNGSVPC MNIEAQEVNN EQVSMKFGDE RQGRDGYSFM GGQTNFIGNF 600 GQYPIGEIGR FDADQFAPRF SGNSVSLTLG LPHCENLSMS GAHHHQTFLP NQNIQLGRRV 660 DTGETNDQFG AINTSAPHSS AAAFENIDIQ SRKRFVAQLL PDFVA

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MATYFHHHRG NSSEIQASSD SALQTLVLMN PAYVPYSDTP PPPQQQQQQP QTPPAATNLV  60
FLNSAANSLT HHPSTLSHAP PSHHQQFVGI PLTQDPNSNS SQSMHHPHHD ISTLHAFMPR  120
IQTQYALWNS IDPTAAARDT PRAQQGLSLS LSSQQPGFGS FQGGATEREV PSGEDIRVSS  180
GSNSSASGVT NGVSGMQSVL LSSKYLKAAQ ELLDEVVNVG NGMRTELPKK GNGQQSKAAA  240
ESAAGDGLVG GEGSGKRASE LSTAERQEIQ MKKGKLINML DEVDQRYRQY HRQMQMVISS  300
FEQAAGIGSA RTYTALALQT ISKQFRCLKD SITNQIRTAN KSLGEEDSVG GKIEGSRLKY  360
VDHQLRQQRA LQQLGMIQHN AWRPQRGLPE RSVSVLRAWL FEHFLHPYPK DSDKHMLAKQ  420
TGLTRSQVSN WFINARVRLW KPMVEEMYME EVKEQEQNGS SEKMSKSNED SASKSTAPQD  480
AENQTTSTFN FKQENSVNHN LAAHPSISIS QASTSPTNMV RNQSGFTLIG SSELDGITQA  540
SPKKPRSTEI MHSSNGSVPC MNIEAQEVNN EQVSMKFGDE RQGRDGYSFM GGQTNFIGNF  600
GQYPIGEIGR FDADQFAPRF SGNSVSLTLG LPHCENLSMS GAHHHQTFLP NQNIQLGRRV  660
DTGETNDQFG AINTSAPHSS AAAFENIDIQ SRKRFVAQLL PDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-154	TALE family protein