PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | SRS | ||||||||
Protein Properties | Length: 219aa MW: 24144.8 Da PI: 9.1003 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 189.7 | 1.1e-58 | 3 | 145 | 6 | 153 |
DUF702 6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrer.qqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelet 102 ++CqdCGnqakk+Ca+ RCRtCCks+gf+C+thvkstWvp+++r + +qql + ++ a+ ++ ++ ++r+ a+ + ++ ++s + ++ PCP004217.1 3 SRCQDCGNQAKKECAYFRCRTCCKSKGFHCQTHVKSTWVPVYRRHHThHQQLPSIDPQHPAHLHQGHNYNPRRP------AAGHVITNPSSSGQDQQV 94 68*****************************************9987356666666666666676666666654......333333444456677889 PP DUF702 103 sslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +++P++v+s+a frcvrvssv+d ++ aYqt+v igGhvfkGiLydqG++ PCP004217.1 95 NNFPADVNSMATFRCVRVSSVEDTVNQHAYQTSVVIGGHVFKGILYDQGPN 145 99***********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MGSRCQDCGN QAKKECAYFR CRTCCKSKGF HCQTHVKSTW VPVYRRHHTH HQQLPSIDPQ 60 HPAHLHQGHN YNPRRPAAGH VITNPSSSGQ DQQVNNFPAD VNSMATFRCV RVSSVEDTVN 120 QHAYQTSVVI GGHVFKGILY DQGPNYTTAA GQSSSSQHVM NKQTSNFISA AASASNITAS 180 TSSAAADHQV PYHHQLPSSY PLIPFNAFMP GTQFFLNPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21400.1 | 1e-48 | SRS family protein |