PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004159.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 344aa    MW: 36617.7 Da    PI: 7.1787
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004159.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.37.8e-33112168360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                   v+Y+eClkNhAa++Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+ev+ e
  PCP004159.1 112 VVMYRECLKNHAANIGGNVFDGCGEFMPS-GEEGTLEALKCAACDCHRNFHRKEVDGE 168
                  689*************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MRTSGSLSYA HLSTKESSPS SAAAAPAADH QQKRRLGIHN GTGSYGSATA PHHQHQTLDN  60
HNPAVLPLQP LIRDPDPDRA LSGTPVAPHG AGLSGSGGGG GGGGGPKSLG KVVMYRECLK  120
NHAANIGGNV FDGCGEFMPS GEEGTLEALK CAACDCHRNF HRKEVDGETA AFSPASRRSS  180
IMLTPLQLPP PLPSSSALHH HHHHHQKYSM PQIVQPVNVA FGSGGGGTES SSEDLNAFEG  240
GAVPPFALSK KRFRTKFTVE QKERMMEFAE RVEWRIQKQD EEEVERFCAE VGVKRQVLRV  300
WMHNNKNTIK KQGDVTATTN AIATGLSFDN VEGEGGEGAA AAED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.13e-61ZF-HD family protein