PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003948.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 280aa MW: 31371 Da PI: 7.5511

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003948.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	135.9	2.7e-42	4	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrF+Pt+eel+++yL++k++g++ ++++i+ v iy+++Pw+Lp+ +++++ ++w+fF++r++ +a+g r++r t++gyWkatg+ PCP003948.1 4 LPPGFRFSPTEEELISFYLQNKLDGRSedlnRVVDRIIPVVYIYEFNPWELPQaageAIHGDPEQWFFFIPRQECEARGGRPRRLTTTGYWKATGSPS 101 79**********************966533334479999******9646655666778****************************** PP NAM 91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyr 127 +v+s+ + +++glk+t+vfy+grap+g+kt+W m+ey+ PCP003948.1 102 TVYSSnssNYRAIGLKRTMVFYTGRAPHGKKTEWKMNEYK 141 95555556*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MEDLPPGFRF SPTEEELISF YLQNKLDGRS EDLNRVVDRI IPVVYIYEFN PWELPQAAGE 60 AIHGDPEQWF FFIPRQECEA RGGRPRRLTT TGYWKATGSP STVYSSNSSN YRAIGLKRTM 120 VFYTGRAPHG KKTEWKMNEY KGIAIHADDN NQPSMTASSS NPSTPTPTLR QEFSLCRVYK 180 KSKCLRAFDR RPPGIEITRN PNLNIQAAPA QATDHLDKGL TTSNRNPQNM EGKTNSSSPE 240 SSSSGGHGSQ SSQPEQSGTL PMAVNNEAIW DLDQLINLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	3e-57	NAC family protein