PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003947.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 281aa MW: 31536.2 Da PI: 6.7998

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003947.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	135.4	3.7e-42	4	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGf+F+Pt+eel+++yL++k++g + ++++i+ v iy+++Pw+Lp+ +++++ ++w+fF++r++++a+g r++r t++gyWkatg+ PCP003947.1 4 LPPGFKFSPTEEELISFYLQNKLDGMSedlnRVVDRIIPVVYIYEFNPWELPQaageAIHGDPEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPS 101 79*********************9966533334479999******9646655666778****************************** PP NAM 91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyr 127 +v+s+ + +++g k+t+vfy+grap+g+kt+W m+ey+ PCP003947.1 102 TVYSSnsnHYRAIGFKRTMVFYTGRAPHGKKTEWKMNEYK 141 95444455*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MEDLPPGFKF SPTEEELISF YLQNKLDGMS EDLNRVVDRI IPVVYIYEFN PWELPQAAGE 60 AIHGDPEQWF FFIPRQESEA RGGRPRRLTT TGYWKATGSP STVYSSNSNH YRAIGFKRTM 120 VFYTGRAPHG KKTEWKMNEY KAIEIHADDN NQPSMAASSS NPSTPSTPTL RQEFSLCRVY 180 KKSKCLRAFD RRPPGIEITR NPNLNIQAAP AQAADHLDQG LTTSNRKPQK MEGRTNSSSP 240 ESSPSGGHGS QSSQPEQSGT LPMAVDNEAI WDLDQLINLL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-59	NAC family protein