PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP003470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 334aa MW: 37810.3 Da PI: 4.919 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.4e-21 | 79 | 132 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k PCP003470.1 79 KKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 132 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 133.6 | 7.1e-43 | 78 | 169 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ +qv++LE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l +++ ke+++L++e+ PCP003470.1 78 EKKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDTLLYTYDSILKENQKLKSEMV 169 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MMEPGRLFFD PSPSAVCQQG GGGGNMLFLG NPDHVFRGPR SMMGLMDHES SRRRPFFSSS 60 SSQDELFDEE YYDEQLPEKK RRLTPDQVHM LEKSFETENK LEPERKTQLA KKLGLQPRQV 120 AVWFQNRRAR WKTKQLERDY DLLKSSYDTL LYTYDSILKE NQKLKSEMVS INEKLGGKEE 180 ANSTKPATYA GDDHDDEKRG PLLPDGDQMT EVVPITSLQH SCTIKAEDRL SSGSGGSAVV 240 DEAEGPQPVD SGDSYNFPNN IHNDYPHDHD THHHHHQYVV PHDHVEHHHS GVHSEEDDGS 300 DDGQGYFSDV FAAAVAEQQA AQEEGVSLGW WGWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 127 | 135 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 5e-72 | HD-ZIP family protein |