PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003332.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 333aa    MW: 36146.1 Da    PI: 9.6021
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003332.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.51.6e-3351106357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 
                   v YkeClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHR e+
  PCP003332.1  51 VVAYKECLKNHAASLGGHALDGCGEFMPSPSSNpADPTSLKCAACGCHRNFHRLEQ 106
                  689******************************9*******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNFTTVTATI QTPDTDTEPP SPSDPKSNFF SSRSLSFTNG AFQPHSTPTM VVAYKECLKN  60
HAASLGGHAL DGCGEFMPSP SSNPADPTSL KCAACGCHRN FHRLEQYRPK SNVIRNPHRL  120
LPAPKPAHYN HSSSPSPSSS PNPTLSPQSP PPVSHLPPSY FASPPQMLLA LSSGFSGPSD  180
EHPHQHQLNP TAVKKTEKYP GEKKRSRTRF SQEQKEKMSS FAEKVGWRLQ KSEERLVEDF  240
CSEVGIGRGV FKVWMHNNKH GRRRLERSGG GNGSIGGGAN MNKNVSEING DGERLGFDSM  300
NAHIAGYNVN ANPLNEGSRA SFHLSNNGSS SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.15e-59ZF-HD family protein