PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003154.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 263aa    MW: 28778 Da    PI: 9.7602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003154.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19106156155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr+++ +g+W+AeIrdp     r  r +lg+f+taeeAa  +++a+ +l+g
  PCP003154.1 106 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTFDTAEEAAVVYDNAAIQLRG 156
                  59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MVANSAEADE FESVRPRVVR ISVTDGNATD SSSDDEAEGS SFCGTRHRVK RFVNEITIES  60
CSNRDTDSAV WRSRMSRTGR KRPSGKSKGP ASGRRDLKAV AAPAGKKFRG VRQRPWGKWA  120
AEIRDPLRRV RLWLGTFDTA EEAAVVYDNA AIQLRGPDAL TNFAPPPPAI SLPDVKPEVS  180
SGFYSGDGSH NHLCSPTSVL RCPSPSNEEA ESPCPKQSPE VTEVRNVRGN SSISKSLSEF  240
SDYTSFETKK SPISETSAFR KKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-44ERF family protein