PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP002930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 196aa MW: 22008.4 Da PI: 9.9566 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.7 | 1.6e-51 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeelv++yL++k+++++l + +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + PCP002930.1 14 LPPGFRFHPTDEELVNHYLCRKCASQPLAV-PIITEIDLYKFDPWHLPHMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKHIGK--PK 108 79*************************999.88***************7666789*************************************98..77 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+ p+g kt+W+mheyrl PCP002930.1 109 ALGIKKALVFYAGKPPNGIKTNWIMHEYRL 138 8***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MSGGGDERKQ QLELPPGFRF HPTDEELVNH YLCRKCASQP LAVPIITEID LYKFDPWHLP 60 HMALYGEKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKHIGKPKAL GIKKALVFYA 120 GKPPNGIKTN WIMHEYRLAN VDRSAAAAKK HKNLRLDDWV LCRIYNKKVT NKMTNTQVAA 180 DGGLLELLGA CAVAGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 1e-100 | NAC family protein |