PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP002601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 186aa MW: 21210.4 Da PI: 6.4138 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 9.6e-16 | 2 | 43 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++eE +l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l PCP002601.1 2 SQEEKDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 43 89****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MSQEEKDLII RMHKLLGNRW SLIAGRLPGR TDNEVKNYWN THLNKNTSCC PAGGKRKGTT 60 MTDYSNHDTN ITKKKNKINT SKTSRTATAT ADNPTADNPM IISSTVRSPK DTNSDHHHQH 120 HEEPNDGPIF ATTSTTEESC FYYDVDIESP RELHYYMPNC SSNFNPAFVF DDEPFIGYMD 180 PFLLFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 3e-25 | MYB family protein |