PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP002532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WOX | ||||||||
Protein Properties | Length: 230aa MW: 25448.1 Da PI: 7.1177 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.5 | 1.5e-15 | 30 | 90 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+ +++eq+ +Le+ F++ +p +ee ++ k l ++ +++V++WFqNrR + ++ PCP002532.1 30 RSRWIPKPEQILILESIFNSgMVNPPKEETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 90 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 105.1 | 4.5e-34 | 29 | 92 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW P+peQi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PCP002532.1 29 VRSRWIPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 92 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEDHHQHQGQ DPDGSSPSNG STERSPEPVR SRWIPKPEQI LILESIFNSG MVNPPKEETV 60 RIRKLLEKFG SVGDANVFYW FQNRRSRSRR RQRQLQASLE QGTNNNINSN PTASLSHHQL 120 RGEIQYGISC SVPAAAPPLA FGASPNNFLM GSSSSSSCGH HLITDHDVHH STACVDDQFF 180 PVSSQMGFPE IEQSSGVTSA LGGGPSDTSN FHFQSVFSTW FQIAFKKILQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 4e-36 | WOX family protein |