PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001921.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

VOZ

Protein Properties

Length: 464aa MW: 51337.2 Da PI: 5.4804

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001921.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	399.8	5.9e-123	216	430	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pp saflgpkcalwdc+rpaq +qdycss ha la neglpg tpvlrp+gi lkdg+lfaal+ak+qgk+vgip+c+gaat +spwn +elf+l PCP001921.1 216 PPVSAFLGPKCALWDCSRPAQV--LCQDYCSSGHALLARNEGLPGNTPVLRPGGIALKDGSLFAALNAKTQGKDVGIPNCDGAATLRSPWNDSELFHL 311 788***************97..6********************************************************************* PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 slleget+rewlff +prrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqpss +ewhl+eye+n++da+alyrlelk +kks+ PCP001921.1 312 SLLEGETLREWLFFGRPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEYGGQKRSYYMDPQPSSDHEWHLFEYEVNNSDACALYRLELKFGTAKKSS 409 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 kgkvs+d+ladlqkk+grlta PCP001921.1 410 KGKVSSDPLADLQKKMGRLTA 430 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MLKDSKGKCE AASHKLLKEK AKTRVQELQG MVTNIQNARK EGRTADIAIW EDQMHQMLGG 60 WGAELNDPSP ASSLHGGSHG SLGSFSEELA RLLKQHCDEK DDAESPLKEL PQPKLEGPEP 120 NLQNPHSINF TEFTEDFFIS SKEPQEDIFQ GLDLDQCHTA SNFPNTVVDI PDLTTQMNDN 180 HFEFPDYLNE GPFISHNDIK QSEEDVVPNV MPDICPPVSA FLGPKCALWD CSRPAQVLCQ 240 DYCSSGHALL ARNEGLPGNT PVLRPGGIAL KDGSLFAALN AKTQGKDVGI PNCDGAATLR 300 SPWNDSELFH LSLLEGETLR EWLFFGRPRR AFESGNRKQR SLPDYSGRGW HESRKQVMKE 360 YGGQKRSYYM DPQPSSDHEW HLFEYEVNNS DACALYRLEL KFGTAKKSSK GKVSSDPLAD 420 LQKKMGRLTA EASTEVGNNS KGKAGKKADA GNIFGSDNQT TPTT

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MLKDSKGKCE AASHKLLKEK AKTRVQELQG MVTNIQNARK EGRTADIAIW EDQMHQMLGG  60
WGAELNDPSP ASSLHGGSHG SLGSFSEELA RLLKQHCDEK DDAESPLKEL PQPKLEGPEP  120
NLQNPHSINF TEFTEDFFIS SKEPQEDIFQ GLDLDQCHTA SNFPNTVVDI PDLTTQMNDN  180
HFEFPDYLNE GPFISHNDIK QSEEDVVPNV MPDICPPVSA FLGPKCALWD CSRPAQVLCQ  240
DYCSSGHALL ARNEGLPGNT PVLRPGGIAL KDGSLFAALN AKTQGKDVGI PNCDGAATLR  300
SPWNDSELFH LSLLEGETLR EWLFFGRPRR AFESGNRKQR SLPDYSGRGW HESRKQVMKE  360
YGGQKRSYYM DPQPSSDHEW HLFEYEVNNS DACALYRLEL KFGTAKKSSK GKVSSDPLAD  420
LQKKMGRLTA EASTEVGNNS KGKAGKKADA GNIFGSDNQT TPTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-152	VOZ family protein