PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001706.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 2216aa MW: 242376 Da PI: 5.3952

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001706.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	43.5	6.5e-14	2074	2101	34	61
zf-Dof 34 kaCrryWtkGGalrnvPvGggrrknkks 61 ++CrryWtkGG+lrnvPv gg+rkn++ PCP001706.1 2074 QGCRRYWTKGGSLRNVPVEGGCRKNRRG 2101 79***********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 2216 aa Download sequence
MGRPEPCVLF AQTFVHPHLD EYVDEVLFAE PIVITACEFL EQNVSFASQS VTLLGATSPP 60 SFALEVFVQC EGETRFRRLC LPFLYSPSSS NVLEVEAVVT NHLVVRGSYR SLSLVIYGNT 120 AEDLGQFNIE FDDSSITNLV SSTEGKLEDL PLALHSTNLK IEESISTLNT LSLPVAASDV 180 SVEAKHLLQL MLKVCELPNL GDALHKIVGI VVSAATSYVT SSWGRSSECE ELRNVLSDAR 240 TELMELYKVF KGESGNDLAE SLEDNGLFEF EVELANSKQL VDVLSQYFRF SRDFLSVVHH 300 QLPQNTNVML GLSVAFLLCS GRESCFHFVT GGGMEQLVHA FCCSNQKSAA TTLLLLGVVE 360 KATQHSFGCE GFLGWWPRED EKILSGASDG YSRLLNLLLQ KQRHDIASCA TYVLHRLRFY 420 EVASTFECAA LSVLGGLSTF GRVTSGTLDM LICAKSQLKK LLKLINSRGP IKDPSPVARA 480 TKSLILGQTE GLSSYKASNN LIASSNCCFS NWDIDMHLLA LLKDKGFLPL SVAILTSSIL 540 RLEVGRVMDI FVDVVSSVEA IILSFLFCRS GLIFLLHHPE LSATIIHALR GADDVNKDAC 600 LPLRYASVSL SKGFFCAPQD VGIIVGVHLR VVTAVDRLLT AAPNSEEFLW VLWELCALAR 660 SDCGRQALLA LGYFPEAVKI LIEALHSAKE PEPVAKNSGA PPLNIAIFHS AAEIFEVIVS 720 DSTASSLGSW IGHVMELHRA LHSSSPGSNR KDAPTRLLEW IDAGVVYHKN GTTGLIQYAA 780 VLASGADAHL TSNIPLVSDL ADVENAVGDT SGGSDVNVME NLGKFISDKT FDGVNLRDSS 840 VAQLTTAFRI LAFISENSTV AATLYDEGVV PIIYAVVVNC RGMLERSSNS YDYLVDEECN 900 TTSDLLSERN REQSLVDLLI PTIVLLINLL QKLQEVQEQH RNTKLLNALL RLHREVSPKL 960 AACAADLSSP YPDSALGFGA ICHLLASALA CWPVYGWTPG LFHSLLANVQ VPSLLALGPK 1020 ETCSLLCLLN DLLPDEGVWL WKNGMPLLSA LRNLSVGTVL GPQKERQVNW YLHHEHLEKL 1080 LSQLTPHLDK VAQIIQHYAI SGLLLKEGAF QLLPRVLNRC LIAIETGGIQ NLDVRSSAAF 1140 GFGLLSWCLP VFKSFSLIFN SQASLHHAGK NDSNEFEKLT TDDCKIFLKY LLRFCQVLPV 1200 GKELLACLIA FKELGACSEG KKALAATLYP ALSVEDHEWR KSPPLLCCCK NLLRSVDSKE 1260 GLSSYGIETV NALSLGSFRF CLDGERLNPD MVVAVKFLFG VSDDDIAEAD GVPDGNLSYI 1320 YELTSLLKTM EADHIADSDT QTPLYEVLES AKSLTLLLQK PSSLLKVDDV FSADSIPLPP 1380 NILVSSNIHI MPDGGAEMAD DYLYQGSLGD KFQWDCPDKS SESNLKRKQP PSLDGPNRRA 1440 RGENSTAEIT NQNVFSRGLG STIASSGPTR RDTFRQRKPN TSRPPSMHVD DYVARERNDG 1500 VSNSNVIAVQ RVGSTSGRPP SIHVDEFMAR QRERQNLVSP VVADAAVPMK SSTPVNDTAT 1560 EKFNKPKQLK ADLDDDLQGI DIVFDGEESE PDDQLLFPQP DDNLQQPAPV ILEQNSPHSI 1620 VEETESDLVT PVAPNMDENT QSEFSSRMSV SRPEIPLTRE PSISSDKKYF EHSDDSMNAT 1680 LHKASSSFDS ATAANNLRFP VFAYNNSSAS SIQIPVGSRM TPQNFFPKNS PQRAGNASNV 1740 PPGFYDQRFV PNQPPLPPMP PPSTPMPLPS TAVISQTSDS VPSQSSPFMN SMTDVQQPLP 1800 TPFQNRSDYL SAFNNGSTSS RNSISSPSGA VRPPPPLPPT PPPFSSSPYN LTPNRTITQS 1860 SMYNQTSAGT TELPQSSTTP SGARVNTYSL SPHMVFRPGS NSMGLYGSIP TQLQGDNATV 1920 LQNLSIAQSS VQVIHSLGQL QPLQPPQIPR PPQPPQHLRP PMQASQQLEQ GVSMQNQVQM 1980 HSLQILQQPH VSPMHAYYQP QQQEFAHAQQ QQQVDHSQQQ AMHQSGDATL QQEDPAMSLH 2040 EYFKSPEAIQ SLLSDRDKLC QLLEQHPKLM QMLQGCRRYW TKGGSLRNVP VEGGCRKNRR 2100 GSKSLRLSTI TTTTTQGHAQ HNTNKSSANT YEGAHNSYGT NVLGDSTSSS MTQDGSHIDL 2160 ALVYANFLNQ KPDNSDSTTR SDRQLPELPS EFNPSAVDFS SMVLNMNNAS LDNTST

Sequence ? help Back to Top

Protein Sequence Length: 2216 aa Download sequence

MGRPEPCVLF AQTFVHPHLD EYVDEVLFAE PIVITACEFL EQNVSFASQS VTLLGATSPP  60
SFALEVFVQC EGETRFRRLC LPFLYSPSSS NVLEVEAVVT NHLVVRGSYR SLSLVIYGNT  120
AEDLGQFNIE FDDSSITNLV SSTEGKLEDL PLALHSTNLK IEESISTLNT LSLPVAASDV  180
SVEAKHLLQL MLKVCELPNL GDALHKIVGI VVSAATSYVT SSWGRSSECE ELRNVLSDAR  240
TELMELYKVF KGESGNDLAE SLEDNGLFEF EVELANSKQL VDVLSQYFRF SRDFLSVVHH  300
QLPQNTNVML GLSVAFLLCS GRESCFHFVT GGGMEQLVHA FCCSNQKSAA TTLLLLGVVE  360
KATQHSFGCE GFLGWWPRED EKILSGASDG YSRLLNLLLQ KQRHDIASCA TYVLHRLRFY  420
EVASTFECAA LSVLGGLSTF GRVTSGTLDM LICAKSQLKK LLKLINSRGP IKDPSPVARA  480
TKSLILGQTE GLSSYKASNN LIASSNCCFS NWDIDMHLLA LLKDKGFLPL SVAILTSSIL  540
RLEVGRVMDI FVDVVSSVEA IILSFLFCRS GLIFLLHHPE LSATIIHALR GADDVNKDAC  600
LPLRYASVSL SKGFFCAPQD VGIIVGVHLR VVTAVDRLLT AAPNSEEFLW VLWELCALAR  660
SDCGRQALLA LGYFPEAVKI LIEALHSAKE PEPVAKNSGA PPLNIAIFHS AAEIFEVIVS  720
DSTASSLGSW IGHVMELHRA LHSSSPGSNR KDAPTRLLEW IDAGVVYHKN GTTGLIQYAA  780
VLASGADAHL TSNIPLVSDL ADVENAVGDT SGGSDVNVME NLGKFISDKT FDGVNLRDSS  840
VAQLTTAFRI LAFISENSTV AATLYDEGVV PIIYAVVVNC RGMLERSSNS YDYLVDEECN  900
TTSDLLSERN REQSLVDLLI PTIVLLINLL QKLQEVQEQH RNTKLLNALL RLHREVSPKL  960
AACAADLSSP YPDSALGFGA ICHLLASALA CWPVYGWTPG LFHSLLANVQ VPSLLALGPK  1020
ETCSLLCLLN DLLPDEGVWL WKNGMPLLSA LRNLSVGTVL GPQKERQVNW YLHHEHLEKL  1080
LSQLTPHLDK VAQIIQHYAI SGLLLKEGAF QLLPRVLNRC LIAIETGGIQ NLDVRSSAAF  1140
GFGLLSWCLP VFKSFSLIFN SQASLHHAGK NDSNEFEKLT TDDCKIFLKY LLRFCQVLPV  1200
GKELLACLIA FKELGACSEG KKALAATLYP ALSVEDHEWR KSPPLLCCCK NLLRSVDSKE  1260
GLSSYGIETV NALSLGSFRF CLDGERLNPD MVVAVKFLFG VSDDDIAEAD GVPDGNLSYI  1320
YELTSLLKTM EADHIADSDT QTPLYEVLES AKSLTLLLQK PSSLLKVDDV FSADSIPLPP  1380
NILVSSNIHI MPDGGAEMAD DYLYQGSLGD KFQWDCPDKS SESNLKRKQP PSLDGPNRRA  1440
RGENSTAEIT NQNVFSRGLG STIASSGPTR RDTFRQRKPN TSRPPSMHVD DYVARERNDG  1500
VSNSNVIAVQ RVGSTSGRPP SIHVDEFMAR QRERQNLVSP VVADAAVPMK SSTPVNDTAT  1560
EKFNKPKQLK ADLDDDLQGI DIVFDGEESE PDDQLLFPQP DDNLQQPAPV ILEQNSPHSI  1620
VEETESDLVT PVAPNMDENT QSEFSSRMSV SRPEIPLTRE PSISSDKKYF EHSDDSMNAT  1680
LHKASSSFDS ATAANNLRFP VFAYNNSSAS SIQIPVGSRM TPQNFFPKNS PQRAGNASNV  1740
PPGFYDQRFV PNQPPLPPMP PPSTPMPLPS TAVISQTSDS VPSQSSPFMN SMTDVQQPLP  1800
TPFQNRSDYL SAFNNGSTSS RNSISSPSGA VRPPPPLPPT PPPFSSSPYN LTPNRTITQS  1860
SMYNQTSAGT TELPQSSTTP SGARVNTYSL SPHMVFRPGS NSMGLYGSIP TQLQGDNATV  1920
LQNLSIAQSS VQVIHSLGQL QPLQPPQIPR PPQPPQHLRP PMQASQQLEQ GVSMQNQVQM  1980
HSLQILQQPH VSPMHAYYQP QQQEFAHAQQ QQQVDHSQQQ AMHQSGDATL QQEDPAMSLH  2040
EYFKSPEAIQ SLLSDRDKLC QLLEQHPKLM QMLQGCRRYW TKGGSLRNVP VEGGCRKNRR  2100
GSKSLRLSTI TTTTTQGHAQ HNTNKSSANT YEGAHNSYGT NVLGDSTSSS MTQDGSHIDL  2160
ALVYANFLNQ KPDNSDSTTR SDRQLPELPS EFNPSAVDFS SMVLNMNNAS LDNTST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	5e-16	Dof family protein