PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001704.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 710aa MW: 78041.5 Da PI: 7.0371

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001704.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	406	443	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PCP001704.1 406 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 443 554459******************************88 PP
2	BELL	121.4	3.9e-39	270	341	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kk kL+++l+eVd+rY+qy+ q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi PCP001704.1 270 ERQEIQMKKGKLINMLDEVDQRYRQYHRQMQMVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITNQI 341 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MAAYFHHHGG NSSEIQASSD GALQTLVLMN PGYVQYSDTP PPPQQQQQQQ QPQPPSAATN 60 LVFLNSAPNS LTHHPSTLSH APPSHHQQFL GIPLTQDPNG NSSLSMHHPH HDISALHAFM 120 PRIQTQYALW NSIDPATSTR DTPRSQQGLS LSLSSQQPGF GSFQETSAER EVPSGEDIRV 180 SSGSNSSASG VTNGVSGMQS VLLSSKYLKA AQELLDEVVN VGNEMRTELP KKGNGQQSKA 240 AAESSMAEAR DGSVGGEGNG KRAAELSTAE RQEIQMKKGK LINMLDEVDQ RYRQYHRQMQ 300 MVISSFEQAA GIGSARTYTA LALQTISKQF RCLKDAITNQ IRSANKSLGE EDSVGGKIEG 360 SRLKYVDHQL RQQRALQQLG MVQHNAWRPQ RGLPERSVSV LRAWLFEHFL HPYPKDSDKH 420 MLAKQTGLTR SQVSNWFINA RVRLWKPMVE EMYLEEAKEQ EKNGSSEKMS KSNEDSASKS 480 TAPQDTENQT TSTFNSKQEN SVNHNVATHP SMSISTPSTS PTNMVRNQSG FTLIGSSELD 540 GITQGSPKKP RSTEIMHSSN STVPCMNMES QEVSNEQVSM KFGDERQGRD GYSFMGGQTN 600 FIGNFGQYPI GEIGRFDADQ FTPRFSGNGV SLTLGLPHCE NLSLSGAHHH QTFLPNQNIQ 660 LGRRVDIGET NDQFGAINTS APHSSAAAFE NIDIQNRKRF VAQLLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MAAYFHHHGG NSSEIQASSD GALQTLVLMN PGYVQYSDTP PPPQQQQQQQ QPQPPSAATN  60
LVFLNSAPNS LTHHPSTLSH APPSHHQQFL GIPLTQDPNG NSSLSMHHPH HDISALHAFM  120
PRIQTQYALW NSIDPATSTR DTPRSQQGLS LSLSSQQPGF GSFQETSAER EVPSGEDIRV  180
SSGSNSSASG VTNGVSGMQS VLLSSKYLKA AQELLDEVVN VGNEMRTELP KKGNGQQSKA  240
AAESSMAEAR DGSVGGEGNG KRAAELSTAE RQEIQMKKGK LINMLDEVDQ RYRQYHRQMQ  300
MVISSFEQAA GIGSARTYTA LALQTISKQF RCLKDAITNQ IRSANKSLGE EDSVGGKIEG  360
SRLKYVDHQL RQQRALQQLG MVQHNAWRPQ RGLPERSVSV LRAWLFEHFL HPYPKDSDKH  420
MLAKQTGLTR SQVSNWFINA RVRLWKPMVE EMYLEEAKEQ EKNGSSEKMS KSNEDSASKS  480
TAPQDTENQT TSTFNSKQEN SVNHNVATHP SMSISTPSTS PTNMVRNQSG FTLIGSSELD  540
GITQGSPKKP RSTEIMHSSN STVPCMNMES QEVSNEQVSM KFGDERQGRD GYSFMGGQTN  600
FIGNFGQYPI GEIGRFDADQ FTPRFSGNGV SLTLGLPHCE NLSLSGAHHH QTFLPNQNIQ  660
LGRRVDIGET NDQFGAINTS APHSSAAAFE NIDIQNRKRF VAQLLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-159	TALE family protein