PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001333.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 902aa MW: 100348 Da PI: 6.0261

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001333.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7.4e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lp GfrF+Ptd el+++yL+ k++g++ ++ vi+e+d++k+ePwdLp + +++++ ew+fF+++d+ky++g+r nrat +gyWkatgkd++++s + PCP001333.1 9 LPLGFRFRPTDAELIDYYLRSKINGNHRQV-AVIREIDVCKWEPWDLPdlSVIQTTDPEWFFFCPQDRKYPNGHRLNRATIKGYWKATGKDRQIKS-D 104 699**********************999.89**********96447778888**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + l+g+kktLvf++grapkg++++Wvmheyr+ PCP001333.1 105 KILIGMKKTLVFHTGRAPKGKRSNWVMHEYRA 136 9***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 902 aa Download sequence
MEVLSMNSLP LGFRFRPTDA ELIDYYLRSK INGNHRQVAV IREIDVCKWE PWDLPDLSVI 60 QTTDPEWFFF CPQDRKYPNG HRLNRATIKG YWKATGKDRQ IKSDKILIGM KKTLVFHTGR 120 APKGKRSNWV MHEYRATQKE LDGTNPGQSS FVLCRLFKKQ DETIEDSNFD EAEPTVSSSI 180 AVVSSPQDVQ SHLAPVPTSP SFERPDEKPL TKVECTFADS GNAMGSDTLP PLPTIEFPSN 240 SCDGYDAEGQ LNMPLGELDM FYDPPQEPLF SPLHSQMHAE LGYYGRNDFS NDHQGVTFPH 300 GTNEQDAYVS EFLSSILNSS GEQIDVDASA AEVQFLKELQ NDVQPEENIV RNDPSLLMSI 360 PEDYGQSSRS EVTSNHLNAI INRDAGTGIK LRARQTQNPT SAESFVTQGD AKRRIRLATK 420 VQRLQCSSRP EDNELKPIAL EEISNNEKKP IGAVDTDVIS ADIDLPEKGT VPTRPNFTAD 480 GSIVTSKRLL SVLLKAVSPA VLKPPEDLSQ PSVPPKPYIL RSPHFMSEYP ILPLWPLLLS 540 FFFSPIPVRQ TETEMGSWSI ANFLLVLLLL PTSLSLCTLH GAPDQTHYPK ELLSAAQQDK 600 NWLLSVRRQI HENPELKFQE YNTSALLRRE LDRLGSLTNT RLPKPELLRK SAPGTVRLLF 660 QPGEEGGAGA SEMINGGAFG EAEAIYGMHV DFTILTGTVV SVAGPHLAAV SMFEAKIVGK 720 GGHAAKPHSS ADLVLAASFA ILALQQLISR ETDPLHSHVV EGQAAVHRCN AYVDTKDEEY 780 PPLPAVVNDE SLHMQAQRVG KLLLGHVNVK LCRKVMAGED SAFYQQLIPG IMLSIGIRNE 840 EAGSVHSPHS PSFLMRMSFQ LGQHHTLPWR RVIWTSTSIL HTLKFESDWR NLDGCILLAL 900 LW

Sequence ? help Back to Top

Protein Sequence Length: 902 aa Download sequence

MEVLSMNSLP LGFRFRPTDA ELIDYYLRSK INGNHRQVAV IREIDVCKWE PWDLPDLSVI  60
QTTDPEWFFF CPQDRKYPNG HRLNRATIKG YWKATGKDRQ IKSDKILIGM KKTLVFHTGR  120
APKGKRSNWV MHEYRATQKE LDGTNPGQSS FVLCRLFKKQ DETIEDSNFD EAEPTVSSSI  180
AVVSSPQDVQ SHLAPVPTSP SFERPDEKPL TKVECTFADS GNAMGSDTLP PLPTIEFPSN  240
SCDGYDAEGQ LNMPLGELDM FYDPPQEPLF SPLHSQMHAE LGYYGRNDFS NDHQGVTFPH  300
GTNEQDAYVS EFLSSILNSS GEQIDVDASA AEVQFLKELQ NDVQPEENIV RNDPSLLMSI  360
PEDYGQSSRS EVTSNHLNAI INRDAGTGIK LRARQTQNPT SAESFVTQGD AKRRIRLATK  420
VQRLQCSSRP EDNELKPIAL EEISNNEKKP IGAVDTDVIS ADIDLPEKGT VPTRPNFTAD  480
GSIVTSKRLL SVLLKAVSPA VLKPPEDLSQ PSVPPKPYIL RSPHFMSEYP ILPLWPLLLS  540
FFFSPIPVRQ TETEMGSWSI ANFLLVLLLL PTSLSLCTLH GAPDQTHYPK ELLSAAQQDK  600
NWLLSVRRQI HENPELKFQE YNTSALLRRE LDRLGSLTNT RLPKPELLRK SAPGTVRLLF  660
QPGEEGGAGA SEMINGGAFG EAEAIYGMHV DFTILTGTVV SVAGPHLAAV SMFEAKIVGK  720
GGHAAKPHSS ADLVLAASFA ILALQQLISR ETDPLHSHVV EGQAAVHRCN AYVDTKDEEY  780
PPLPAVVNDE SLHMQAQRVG KLLLGHVNVK LCRKVMAGED SAFYQQLIPG IMLSIGIRNE  840
EAGSVHSPHS PSFLMRMSFQ LGQHHTLPWR RVIWTSTSIL HTLKFESDWR NLDGCILLAL  900
LW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	1e-103	NAC family protein