PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000994.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 636aa MW: 71027.1 Da PI: 4.3785

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000994.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.5	2.7e-53	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 l+pGfrFhPtdeelv++yLk+kv+gk++++ + i+ vdiyk+ePwdLp k k+k+++ ewyfFs dkky +++r+nrat++gyWk+tgkd++v++ + PCP000994.1 9 LAPGFRFHPTDEELVWYYLKRKVSGKNFRF-DPISVVDIYKTEPWDLPgKsKLKTRDLEWYFFSFLDKKYGNSSRTNRATEKGYWKTTGKDRPVKH-N 104 579************************9.99***********5347777888**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLvf++grap+g +t+Wvmheyrl PCP000994.1 105 SRDVGMKKTLVFHSGRAPTGARTNWVMHEYRL 136 99**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MARGKDNSLA PGFRFHPTDE ELVWYYLKRK VSGKNFRFDP ISVVDIYKTE PWDLPGKSKL 60 KTRDLEWYFF SFLDKKYGNS SRTNRATEKG YWKTTGKDRP VKHNSRDVGM KKTLVFHSGR 120 APTGARTNWV MHEYRLSNEE LEKAGIQQVW IFVDVAIVLL AFYDIGIDCW ICCGGWVQKD 180 PYVLCRIFQK SGTGPKNGEK YGAPVMEEEW DDDDVTGVPG EEAAANVVVL SEEPHVEAIG 240 VNDGAYVEAF DLDQNLDTGI PSESAPPPSN FYYGETSHYF EHSGDFVEDD TKAVIGTGET 300 SEYCGDQMFF NYPEHHETVE NPVKNEYMTS QSPEDLKFVD LPEHNEADAK SVKDECFLEP 360 SNDANPAVNY SLNEPYLNAT ENTPIGDGLF LEAKDLSNPV ESTAGFDMLD EYLTYFDAND 420 DISQYIDFDS CGMMGVEDYV PDEAPADQKL VNGETEPQPM GGEHVQPEPQ PMGGEHLAQP 480 VDTDDASSSK KMAEFKFESD GNYPFIKKAS HMMLGSIPAP PAFASEFPGK EAMRRLNSGA 540 ASSSSVHVTA GMIRIRDITS SDNRMDWSFG KDGVVNLVFS VQLSQNDGNS GNLVPVGGSL 600 SGKTGCVVMR GWFLFMFFWV LFLSMSLKIG SYIYTR

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MARGKDNSLA PGFRFHPTDE ELVWYYLKRK VSGKNFRFDP ISVVDIYKTE PWDLPGKSKL  60
KTRDLEWYFF SFLDKKYGNS SRTNRATEKG YWKTTGKDRP VKHNSRDVGM KKTLVFHSGR  120
APTGARTNWV MHEYRLSNEE LEKAGIQQVW IFVDVAIVLL AFYDIGIDCW ICCGGWVQKD  180
PYVLCRIFQK SGTGPKNGEK YGAPVMEEEW DDDDVTGVPG EEAAANVVVL SEEPHVEAIG  240
VNDGAYVEAF DLDQNLDTGI PSESAPPPSN FYYGETSHYF EHSGDFVEDD TKAVIGTGET  300
SEYCGDQMFF NYPEHHETVE NPVKNEYMTS QSPEDLKFVD LPEHNEADAK SVKDECFLEP  360
SNDANPAVNY SLNEPYLNAT ENTPIGDGLF LEAKDLSNPV ESTAGFDMLD EYLTYFDAND  420
DISQYIDFDS CGMMGVEDYV PDEAPADQKL VNGETEPQPM GGEHVQPEPQ PMGGEHLAQP  480
VDTDDASSSK KMAEFKFESD GNYPFIKKAS HMMLGSIPAP PAFASEFPGK EAMRRLNSGA  540
ASSSSVHVTA GMIRIRDITS SDNRMDWSFG KDGVVNLVFS VQLSQNDGNS GNLVPVGGSL  600
SGKTGCVVMR GWFLFMFFWV LFLSMSLKIG SYIYTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-146	NAC family protein