PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000794.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 233aa    MW: 26558 Da    PI: 9.2651
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000794.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84e-11108149351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  PCP000794.1 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 149
                  79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVSLRRRRLL GLGLCCEIPP VLDPLPRVVN NGTTSQNFTR TNPVSVHPMP ANDVNQPDGN  60
TIVKAEFRSS TASGSSLSKE QHDVAGPPIK RRKRHRRKHA QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA AHLYDRAAFM CGREPNFDLS EEEKKELRKF KWDEFLAMTR  180
HAITNKKHRR RSGAESEKRS VSPQLEDANW EDDKEEVNVL SASEDADQDM LDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-47ERF family protein