PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0009560.1_g010.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 171aa MW: 19854.2 Da PI: 5.2799 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.1 | 1.4e-09 | 83 | 116 | 2 | 35 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevik 35 ppG+rF+P deel+v+yLkkkv ++l+ +++i+ Pav_sc0009560.1_g010.1.mk 83 PPGYRFNPLDEELIVHYLKKKVLYQPLPPNRIIE 116 9***********************9987755443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MEPVEQSHQH HKASVTSQVA SYRLINKQSH AQAHLTHELT QPNEPGNSFI TNVSAGTELS 60 DDESNSFNNN LKNEEDEFFN SFPPGYRFNP LDEELIVHYL KKKVLYQPLP PNRIIELDNW 120 VLCRIYKKVD KNSKRCETRN HVEDSLSPQP QIINGEGMEM EMEMRTLFDP M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 7e-10 | NAC family protein |