PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0009436.1_g010.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 79aa MW: 8903.12 Da PI: 5.7987 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 24.7 | 7.8e-08 | 42 | 79 | 1 | 38 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCske 38 ++Yn+YA +GF +r ++s + ++ei +++fvC k+ Pav_sc0009436.1_g010.1.br 42 NYYNKYAFLAGFGIRLHSSFPGTYKKEILRKEFVCCKQ 79 69*********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence |
MSGGSESDDC VTANGMVYIP EVRNEETPAV GMKFDSLDLA YNYYNKYAFL AGFGIRLHSS 60 FPGTYKKEIL RKEFVCCKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 8e-09 | FAR1 family protein |